RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 LARGE1O95461 756 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 PSAPP07602 524 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ACTN1P12814 892 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ESRRGP62508 458 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 NCAPG2Q86XI2 1143 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 GRAMD1CQ8IYS0 662 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 PDIK1LQ8N165 341 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 CHAMP1Q96JM3 812 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 CEP170P1Q96L14 293 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 STRBPQ96SI9 672 aaKnown RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 TTC1Q99614 292 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 TSPYL2Q9H2G4 693 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 KIAA1586Q9HCI6 787 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ABCB6Q9NP58 842 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 TLK1Q9UKI8 766 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 FAF1Q9UNN5 650 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 MAPK13O15264 365 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 DCTN3O75935 186 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 DEUP1Q05D60 604 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 MYO1EQ12965 1108 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 DOK7Q18PE1 504 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 RAPH1Q70E73 1250 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 METTL23Q86XA0 190 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 SNX25Q9H3E2 840 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ZNF408Q9H9D4 720 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 SLC12A6Q9UHW9 1150 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 GRID2IPA4D2P6 1211 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 GOLGA8FQ08AF8 430 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 GOLGA8DPQ0D2H9 430 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 PRKG1Q13976 671 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 TTC13Q8NBP0 860 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 N4BP2L2Q92802 583 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 FTOQ9C0B1 505 aaKnown RBP eCLIP7.55□□□□□ -1.22e-18■□□□□ 11.2
CTNND1-236ENST00000533667 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 FAM8A1Q9UBU6 413 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 PACSIN2Q9UNF0 486 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 NOVA2Q9UNW9 492 aaKnown RBP7.55□□□□□ -1.2
CTNND1-236ENST00000533667 TYW5A2RUC4 315 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 LRRN2O75325 713 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 IFRD2Q12894 506 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ALX1Q15699 326 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 DARS2Q6PI48 645 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 FBXO38Q6PIJ6 1188 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PCGF5Q86SE9 256 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 MORC4Q8TE76 937 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.25e-6■■■□□ 16.7
CTNND1-236ENST00000533667 RBM41Q96IZ5 413 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 SCOCQ9UIL1 159 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PRKAB2O43741 272 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PRPSAP2O60256 369 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 KRT10P13645 584 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 RFX1P22670 979 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 RANBP1P43487 201 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 JAK3P52333 1124 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 KCTD1Q719H9 257 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PDZD8Q8NEN9 1154 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TCP11Q8WWU5 503 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 DCPSQ96C86 337 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 CCDC124Q96CT7 223 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ANO3Q9BYT9 981 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ORC6Q9Y5N6 252 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 CLIC2O15247 247 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 MAP3K7O43318 606 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TJP3O95049 919 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 BLVRAP53004 296 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TOB2Q14106 344 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 SUPT20HL1Q3ZLR7 823 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 GADL1Q6ZQY3 521 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 KCTD6Q8NC69 237 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TTC25Q96NG3 672 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ABHD10Q9NUJ1 306 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 F8W8V4 182 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ZMYND10O75800 440 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 KRT37O76014 449 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 OSBPP22059 807 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 RCN2Q14257 317 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 SPOUT1Q5T280 376 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 TTC19Q6DKK2 380 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 DPY19L2Q6NUT2 758 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 ARMCX2Q7L311 632 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 EDEM3Q9BZQ6 932 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 COA1Q9GZY4 146 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 PIH1D3Q9NQM4 214 aaKnown RBP7.54□□□□□ -1.2
CTNND1-236ENST00000533667 A2ML1A8K2U0 1454 aa7.54□□□□□ -1.2
CTNND1-236ENST00000533667 INO80B-WBP1J3KQ70 363 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ZNF189O75820 626 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DDIT3P35638 169 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 BASP1P80723 227 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms