RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ARHGEF15O94989 841 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 IFNAR1P17181 557 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 STAT5BP51692 787 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.4
CPSF1-211ENST00000533492 FAM26DQ5JW98 314 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 RUFY4Q6ZNE9 571 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 PLPPR4Q7Z2D5 763 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
CPSF1-211ENST00000533492 APBB2Q92870 758 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
CPSF1-211ENST00000533492 PRDM6Q9NQX0 595 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 INSL6Q9Y581 213 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.4
CPSF1-211ENST00000533492 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 FAM86B1E9PN63 330 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 DDX39AO00148 427 aaKnown RBP17.57■□□□□ 0.4
CPSF1-211ENST00000533492 CYP3A4P08684 503 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 FAM86B2P0C5J1 330 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 INSRRP14616 1297 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 EVCP57679 992 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 NTRK3Q16288 839 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 DNAJB3Q8WWF6 145 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 PCYT2Q99447 389 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 IFIH1Q9BYX4 1025 aaKnown RBP17.57■□□□□ 0.4
CPSF1-211ENST00000533492 TM6SF1Q9BZW5 370 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 THEGQ9P2T0 379 aa17.57■□□□□ 0.4
CPSF1-211ENST00000533492 MBLAC1A4D2B0 266 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 EPOPA6NHQ4 379 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 CPLX1O14810 134 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 BACH1O14867 736 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 CHRNA1P02708 482 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 RPLP2P05387 115 aaKnown RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 POU3F3P20264 500 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 SSRP1Q08945 709 aaKnown RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 TOB2Q14106 344 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 PLCB4Q15147 1175 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 SKIV2LQ15477 1246 aaKnown RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 ATXN2LQ8WWM7 1075 aaKnown RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 TGS1Q96RS0 853 aaKnown RBP17.56■□□□□ 0.4
CPSF1-211ENST00000533492 OSBPL7Q9BZF2 842 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 MTCH2Q9Y6C9 303 aa17.56■□□□□ 0.4
CPSF1-211ENST00000533492 POTEB3A0JP26 581 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 UPP2O95045 317 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 ATG7O95352 703 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 GHRP10912 638 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 SLC26A2P50443 739 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 NLRP5P59047 1200 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 SETQ01105 290 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 MARCH8Q5T0T0 291 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 POTEBQ6S5H4 581 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 ZNF274Q96GC6 653 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 UIMC1Q96RL1 719 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 FAM49AQ9H0Q0 323 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-211ENST00000533492 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 TCEAL9Q9UHQ7 104 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 MTUS1Q9ULD2 1270 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 MICAL3Q7RTP6 2002 aa17.55■□□□□ 0.4
CPSF1-211ENST00000533492 PRRC2BQ5JSZ5 2229 aaKnown RBP17.54■□□□□ 0.4
CPSF1-211ENST00000533492 IGLV3-22A0A075B6J6 115 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 LINC01553A4QN01 128 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 M0QZ92 97 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 CCNE2O96020 404 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 ERVK-21P61565 698 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 GRB10Q13322 594 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
CPSF1-211ENST00000533492 IER5Q5VY09 327 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 MIS18BP1Q6P0N0 1132 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 SPRED2Q7Z698 418 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 RASGRP4Q8TDF6 673 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 CRYGNQ8WXF5 182 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 TOP1MTQ969P6 601 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 YME1L1Q96TA2 773 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 SH3GLB2Q9NR46 395 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 CDY2AQ9Y6F7 541 aa17.54■□□□□ 0.4
CPSF1-211ENST00000533492 MRPS5P82675 430 aaKnown RBP17.53■□□□□ 0.4
CPSF1-211ENST00000533492 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
CPSF1-211ENST00000533492 MGAT3Q09327 533 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 STK3Q13188 491 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 PRR16Q569H4 304 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 KRT40Q6A162 431 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 PDXDC2PQ6P474 469 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 ABHD15Q6UXT9 468 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms