RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 HPSEQ9Y251 543 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 MRFAP1Q9Y605 127 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 GYPCP04921 128 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 KLK7P49862 253 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 NCAPHQ15003 741 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 SUPT20HL1Q3ZLR7 823 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 DYDC2Q96IM9 177 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.24
RAD50-209ENST00000533482 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 NFU1Q9UMS0 254 aa13.52□□□□□ -0.24
RAD50-209ENST00000533482 SERPING1P05155 500 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 LIG3P49916 1009 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 PSMD2Q13200 908 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
RAD50-209ENST00000533482 APOL6Q9BWW8 343 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 FAM217BQ9NTX9 383 aaPredicted RBP13.52□□□□□ -0.25
RAD50-209ENST00000533482 NKIRAS1Q9NYS0 192 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 TCRBV5S4A2TA0A5A2 114 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 ZNF185O15231 689 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 PALMO75781 387 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 DENND2CQ68D51 928 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 NYAP1Q6ZVC0 841 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
RAD50-209ENST00000533482 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 MMS19Q96T76 1030 aa13.52□□□□□ -0.25
RAD50-209ENST00000533482 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 SLURP2P0DP57 97 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 R3HDM1Q15032 1099 aaKnown RBP13.51□□□□□ -0.25
RAD50-209ENST00000533482 STRIP1Q5VSL9 837 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 SNRNP48Q6IEG0 339 aaKnown RBP13.51□□□□□ -0.25
RAD50-209ENST00000533482 CCSER1Q9C0I3 900 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 SERPINA10Q9UK55 444 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 TMOD1P28289 359 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 CNGA1P29973 690 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
RAD50-209ENST00000533482 PLTPP55058 493 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 EVX2Q03828 476 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 CCDC63Q8NA47 563 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 FBF1Q8TES7 1133 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.51□□□□□ -0.25
RAD50-209ENST00000533482 FERP16591 822 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 HNRNPH2P55795 449 aaKnown RBP13.51□□□□□ -0.25
RAD50-209ENST00000533482 VSNL1P62760 191 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 MTMR1Q13613 665 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 C16orf86Q6ZW13 317 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
RAD50-209ENST00000533482 PVALEFA0A1B0GWK0 134 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 MYMKA6NI61 221 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 STXBP3O00186 592 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 RGS16O15492 202 aaPredicted RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 USP14P54578 494 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 SEC23AQ15436 765 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 LIMA1Q9UHB6 759 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 DCCP43146 1447 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 HMGCS2P54868 508 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 ADCY1Q08828 1119 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 VGLL3A8MV65 326 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 IFNAR2P48551 515 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 SNX1Q13596 522 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 KAZNQ674X7 775 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 MAK16Q9BXY0 300 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 MKRN1Q9UHC7 482 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 IPO5O00410 1097 aaKnown RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 GRIK5Q16478 980 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 LDHDQ86WU2 507 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 PRMT6Q96LA8 375 aaPredicted RBP13.5□□□□□ -0.25
RAD50-209ENST00000533482 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
RAD50-209ENST00000533482 PSMD14O00487 310 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 TMEM191BP0C7N4 346 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 TAL1P17542 331 aaPredicted RBP13.49□□□□□ -0.25
RAD50-209ENST00000533482 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 SLC10A5Q5PT55 438 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 MSANTD4Q8NCY6 345 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 SMARCAL1Q9NZC9 954 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 PGRMC1O00264 195 aaKnown RBP13.49□□□□□ -0.25
RAD50-209ENST00000533482 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 NR3C1P04150 777 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms