RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
BDNF-218ENST00000533246 GAS8O95995 478 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 GRM4Q14833 912 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 TBC1D31Q96DN5 1066 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 RGL1Q9NZL6 768 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 NFU1Q9UMS0 254 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 PEX3P56589 373 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 TROAPQ12815 778 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 HHATQ5VTY9 493 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 CTAGE3PQ8IX95 158 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 TRIP13Q15645 432 aaPredicted RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 ITFG2Q969R8 447 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
BDNF-218ENST00000533246 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
BDNF-218ENST00000533246 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 MYO1FO00160 1098 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 ORC4O43929 436 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 CHRNA5P30532 468 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 KCNH2Q12809 1159 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 SF3B3Q15393 1217 aaKnown RBP13.27□□□□□ -0.28
BDNF-218ENST00000533246 MTERF2Q49AM1 385 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 RAD9BQ6WBX8 426 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 MMS19Q96T76 1030 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 TRIM9Q9C026 710 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 RAB17Q9H0T7 212 aa13.27□□□□□ -0.28
BDNF-218ENST00000533246 NPR1P16066 1061 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 VSIG1Q86XK7 387 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
BDNF-218ENST00000533246 ZNF653Q96CK0 615 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 IWS1Q96ST2 819 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 PPFIA4O75335 1185 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 MYL1P05976 194 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
BDNF-218ENST00000533246 CASC4Q6P4E1 433 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 FAM71BQ8TC56 605 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 TUBE1Q9UJT0 475 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 ZNF148Q9UQR1 794 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.29
BDNF-218ENST00000533246 INO80B-WBP1J3KQ70 363 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 PALMO75781 387 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 ARHGAP25P42331 645 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 GCLMP48507 274 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 PDE6CP51160 858 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 LRRC63Q05C16 580 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 COASYQ13057 564 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 CC2D1AQ6P1N0 951 aaPredicted RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 MYLK4Q86YV6 388 aaPredicted RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 INO80BQ9C086 356 aaPredicted RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 ZNF185O15231 689 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 SNUPNO95149 360 aaKnown RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 SETDB1Q15047 1291 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 ZNF394Q53GI3 561 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 ADGRA1Q86SQ6 560 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 KCNB2Q92953 911 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 CSADQ9Y600 493 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 BAG6P46379 1132 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 CYP4F22Q6NT55 531 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
BDNF-218ENST00000533246 TC2NQ8N9U0 490 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 RNF169Q8NCN4 708 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 MIEF2Q96C03 454 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 AFF2P51816 1311 aa13.26□□□□□ -0.29
BDNF-218ENST00000533246 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 TRIM49P0CI25 452 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 TRIM49CP0CI26 452 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 MXI1P50539 228 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms