RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 BECN1Q14457 450 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 STOX1Q6ZVD7 989 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 NEK1Q96PY6 1258 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
TRAPPC4-213ENST00000533149 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 ENPP3O14638 875 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 GGPS1O95749 300 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 TGFB3P10600 412 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 GPATCH4Q5T3I0 446 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 CDCA3Q99618 268 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 SORCS3Q9UPU3 1222 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 NR2E1Q9Y466 385 aa13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-213ENST00000533149 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 CLCN5P51795 746 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 TTC14Q96N46 770 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 MLXIPQ9HAP2 919 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 PXMP2Q9NR77 195 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 PDRG1Q9NUG6 133 aa13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-213ENST00000533149 KRT37O76014 449 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 CHRNA1P02708 482 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 LGALS2P05162 132 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
TRAPPC4-213ENST00000533149 FGRP09769 529 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 GHRP10912 638 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 RPS6KB1P23443 525 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 UBE3AQ05086 875 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-213ENST00000533149 CDC37Q16543 378 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-213ENST00000533149 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 RMDN1Q96DB5 314 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 SETD4Q9NVD3 440 aa13□□□□□ -0.33
TRAPPC4-213ENST00000533149 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 PER2O15055 1255 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 SORBS3O60504 671 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 RGS20O76081 388 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 PUM1Q14671 1186 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 TMEM184AQ6ZMB5 413 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 S1PR5Q9H228 398 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 SEMA4AQ9H3S1 761 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 PCDHGC5Q9Y5F6 944 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 MYH7BA7E2Y1 1941 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 DCHS1Q96JQ0 3298 aa12.99□□□□□ -0.33
TRAPPC4-213ENST00000533149 BRD1O95696 1058 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 STAG3L1P0CL83 205 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 HOXB8P17481 243 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 UBA1P22314 1058 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 MCM2P49736 904 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 TRDNQ13061 729 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 LPIN1Q14693 890 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 DUSP6Q16828 381 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 VN1R2Q8NFZ6 395 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 NCOA7Q8NI08 942 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 PDCD2LQ9BRP1 358 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 MAP3K20Q9NYL2 800 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 PCDHB12Q9Y5F1 795 aa12.98□□□□□ -0.33
TRAPPC4-213ENST00000533149 NRCAMQ92823 1304 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 PPFIA3O75145 1194 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 CFBP00751 764 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 AK2P54819 239 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 ADAM17P78536 824 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 SP2Q02086 613 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms