RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MED24O75448 989 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 TXNP10599 105 aaKnown RBP20.66■□□□□ 0.9
SMPD1-208ENST00000533123 ZNF75DP51815 510 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 GRB10Q13322 594 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 ACVR2BQ13705 512 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 CCDC62Q6P9F0 684 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 CATSPER3Q86XQ3 398 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 ERMNQ8TAM6 284 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 PNMA5Q96PV4 448 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 ZHX1Q9UKY1 873 aaPredicted RBP20.66■□□□□ 0.9
SMPD1-208ENST00000533123 FKTNO75072 461 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 PTGS1P23219 599 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 OLFML2BQ68BL8 750 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 HAUS3Q68CZ6 603 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 KCNV1Q6PIU1 500 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 TRIML1Q8N9V2 468 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 SPC24Q8NBT2 197 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 SLC9A2Q9UBY0 812 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 TCEAL9Q9UHQ7 104 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 POTEB3A0JP26 581 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 GGPS1O95749 300 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 SPATA31C1P0DKV0 1188 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 XRCC5P13010 732 aaKnown RBP20.65■□□□□ 0.9
SMPD1-208ENST00000533123 ADCYAP1R1P41586 468 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 KRT76Q01546 638 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 TTLL4Q14679 1199 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 POTEBQ6S5H4 581 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 COPS5Q92905 334 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 HSD17B14Q9BPX1 270 aa20.65■□□□□ 0.9
SMPD1-208ENST00000533123 GTPBP6O43824 516 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-208ENST00000533123 RPA1P27694 616 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 CTTNQ14247 550 aaKnown RBP20.64■□□□□ 0.89
SMPD1-208ENST00000533123 NEDD9Q14511 834 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 EPHA7Q15375 998 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 SARM1Q6SZW1 724 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 DYDC2Q96IM9 177 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 HSD3B7Q9H2F3 369 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 KIAA1024Q9UPX6 916 aa20.64■□□□□ 0.89
SMPD1-208ENST00000533123 FARP2O94887 1054 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 SLITRK3O94933 977 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 GJC2Q5T442 439 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 ZNF746Q6NUN9 644 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 SMYD4Q8IYR2 804 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 GIMAP8Q8ND71 665 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 ERO1AQ96HE7 468 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 POTEFA5A3E0 1075 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 WDR64B1ANS9 1081 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 IKBKBO14920 756 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 RRP9O43818 475 aaKnown RBP20.63■□□□□ 0.89
SMPD1-208ENST00000533123 IGHA2P01877 340 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 POTEGQ6S5H5 508 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 KCNK18Q7Z418 384 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 TRIB2Q92519 343 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 MLXIPQ9HAP2 919 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
SMPD1-208ENST00000533123 ACTR2P61160 394 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 MYL5Q02045 173 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 CCDC144BQ3MJ40 725 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 HS1BP3Q53T59 392 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 BANK1Q8NDB2 785 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 POLR3CQ9BUI4 534 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-208ENST00000533123 STK24Q9Y6E0 443 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 KDM3AQ9Y4C1 1321 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 RBM47A0AV96 593 aaKnown RBP20.62■□□□□ 0.89
SMPD1-208ENST00000533123 SMTNL1A8MU46 457 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 HOXD10P28358 340 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 JAK3P52333 1124 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 TMEM119Q4V9L6 283 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 CELF3Q5SZQ8 465 aaKnown RBP20.62■□□□□ 0.89
SMPD1-208ENST00000533123 HYIQ5T013 277 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 METTL7BQ6UX53 244 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 TRMT44Q8IYL2 757 aaKnown RBP20.62■□□□□ 0.89
SMPD1-208ENST00000533123 NT5C3AQ9H0P0 336 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 KBTBD4Q9NVX7 518 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 WRAP73Q9P2S5 460 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-208ENST00000533123 PCDHA10Q9Y5I2 948 aa20.62■□□□□ 0.89
SMPD1-208ENST00000533123 CD44P16070 742 aaKnown RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 SFNP31947 248 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 HSP90AA2PQ14568 343 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 DHX37Q8IY37 1157 aaKnown RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 MED15Q96RN5 788 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 RPN1P04843 607 aaKnown RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 ZNF865P0CJ78 1059 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 ATP1A3P13637 1013 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 HSDL1Q3SXM5 330 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 SMAP1Q8IYB5 467 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-208ENST00000533123 LXNQ9BS40 222 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 TUFT1Q9NNX1 390 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 BLOC1S4Q9NUP1 217 aa20.61■□□□□ 0.89
SMPD1-208ENST00000533123 E9PMD0 336 aa20.6■□□□□ 0.89
SMPD1-208ENST00000533123 ELNP15502 786 aa20.6■□□□□ 0.89
SMPD1-208ENST00000533123 SMPD1P17405 629 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms