RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FAM109BQ6ICB4 259 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 ZNF746Q6NUN9 644 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 TRAF7Q6Q0C0 670 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 ABHD15Q6UXT9 468 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 DEFB123Q8N688 67 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 OXER1Q8TDS5 423 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 CDH23Q9H251 3354 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 EVPLQ92817 2033 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 TDP2O95551 362 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 ACTN1P12814 892 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 KRT76Q01546 638 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 GPNMBQ14956 572 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 GRIK4Q16099 956 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 INF2Q27J81 1249 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 Q7L0L9 218 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
CPSF1-210ENST00000532935 MICAL3Q7RTP6 2002 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 ZBBXA8MT70 800 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 BACH1O14867 736 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 NBNO60934 754 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 CAND2O75155 1236 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 CXCL10P02778 98 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 KRT2P35908 639 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 SLC26A2P50443 739 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 FAM160B1Q5W0V3 765 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
CPSF1-210ENST00000532935 SMAP1Q8IYB5 467 aaPredicted RBP17.4■□□□□ 0.38
CPSF1-210ENST00000532935 SLC5A5Q92911 643 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
CPSF1-210ENST00000532935 MBOAT7Q96N66 472 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
CPSF1-210ENST00000532935 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
CPSF1-210ENST00000532935 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 CHD9Q3L8U1 2897 aa17.4■□□□□ 0.38
CPSF1-210ENST00000532935 MBLAC1A4D2B0 266 aaPredicted RBP17.39■□□□□ 0.37
CPSF1-210ENST00000532935 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 GRXCR1A8MXD5 290 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 INSRRP14616 1297 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 FOSBP53539 338 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 IGBP1P78318 339 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 TRIM29Q14134 588 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 LETM2Q2VYF4 491 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 RUFY4Q6ZNE9 571 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 PIK3AP1Q6ZUJ8 805 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 NEK8Q86SG6 692 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 RIT2Q99578 217 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 TUBE1Q9UJT0 475 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 PCDHA10Q9Y5I2 948 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 COL6A3P12111 3177 aa17.39■□□□□ 0.37
CPSF1-210ENST00000532935 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 ST18O60284 1047 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 GAS7O60861 476 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 MMP1P03956 469 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 PSAPP07602 524 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 DNAJB2P25686 324 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 NR5A1Q13285 461 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
CPSF1-210ENST00000532935 ZNF697Q5TEC3 545 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 TAF2Q6P1X5 1199 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 ETNPPLQ8TBG4 499 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 TNFRSF25Q93038 417 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 GJA10Q969M2 543 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 DDX25Q9UHL0 483 aaKnown RBP17.38■□□□□ 0.37
CPSF1-210ENST00000532935 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
CPSF1-210ENST00000532935 SLC37A4O43826 429 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 CTSHP09668 335 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 KRT40Q6A162 431 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 CNKSR3Q6P9H4 555 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 PBX4Q9BYU1 374 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 UNC45AQ9H3U1 944 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 MTMR10Q9NXD2 777 aa17.37■□□□□ 0.37
CPSF1-210ENST00000532935 MAFBQ9Y5Q3 323 aaPredicted RBP17.37■□□□□ 0.37
CPSF1-210ENST00000532935 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
CPSF1-210ENST00000532935 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms