RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 CAMTA2O94983 1202 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 SLC9A1P19634 815 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 COPB2P35606 906 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 USP11P51784 963 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 NAA25Q14CX7 972 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 ZNF571Q7Z3V5 609 aaPredicted RBP16.17■□□□□ 0.18
LTBP3-221ENST00000532932 DAAM2Q86T65 1068 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 CCDC113Q9H0I3 377 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 TOM1O60784 492 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 ADAM9Q13443 819 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
LTBP3-221ENST00000532932 PBKQ96KB5 322 aa16.17■□□□□ 0.18
LTBP3-221ENST00000532932 PLCH1Q4KWH8 1693 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 CLTAP09496 248 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 KCNH2Q12809 1159 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 MTMR3Q13615 1198 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 DDB1Q16531 1140 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 ECM1Q16610 540 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 COBLL1Q53SF7 1204 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 DCAF17Q5H9S7 520 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-221ENST00000532932 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
LTBP3-221ENST00000532932 PSMD1Q99460 953 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 GGA2Q9UJY4 613 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 ABCB11O95342 1321 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 SCFD2Q8WU76 684 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.181e-10■□□□□ 10.2
LTBP3-221ENST00000532932 E9PMD0 336 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 MYBP10242 640 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 CCDC26Q8TAB7 109 aa16.16■□□□□ 0.18
LTBP3-221ENST00000532932 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-221ENST00000532932 UTP11Q9Y3A2 253 aaKnown RBP16.16■□□□□ 0.18
LTBP3-221ENST00000532932 NUP98P52948 1817 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 BYSLQ13895 437 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 IFI16Q16666 785 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 FAM133BQ5BKY9 247 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 U2AF1L4Q8WU68 220 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 SYN2Q92777 582 aaPredicted RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 TATDN2Q93075 761 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 TMEM59LQ9UK28 342 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 CAND2O75155 1236 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 UBE2SQ16763 222 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
LTBP3-221ENST00000532932 FBXO33Q7Z6M2 555 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 TXNRD3Q86VQ6 643 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 PROM2Q8N271 834 aa16.15■□□□□ 0.18
LTBP3-221ENST00000532932 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 BRD2P25440 801 aaKnown RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 IFNAR2P48551 515 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 AGBL2Q5U5Z8 902 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 SPTY2D1Q68D10 685 aaPredicted RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 TMC3Q7Z5M5 1100 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 RPAINQ86UA6 219 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 CCDC50Q8IVM0 306 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 CCDC197Q8NCU1 140 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 CHMP6Q96FZ7 201 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 XPO6Q96QU8 1125 aaKnown RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 GGT7Q9UJ14 662 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 NEBLO76041 1014 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 FGGP02679 453 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 VIMP08670 466 aaKnown RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 DRD4P21917 467 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 EIF6P56537 245 aaKnown RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 TBC1D1Q86TI0 1168 aaPredicted RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 TRIM59Q8IWR1 403 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 EYA3Q99504 573 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 KIF1CO43896 1103 aaKnown RBP16.14■□□□□ 0.17
LTBP3-221ENST00000532932 PSMD2Q13200 908 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 MIEF2Q96C03 454 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
LTBP3-221ENST00000532932 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 LRP5O75197 1615 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 USP17L5A8MUK1 530 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 F8VZ95 297 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 CETN3O15182 167 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
LTBP3-221ENST00000532932 PAX7P23759 505 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 NR2F2P24468 414 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 MMP14P50281 582 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 ACTRT1Q8TDG2 376 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 ELAC2Q9BQ52 826 aaKnown RBP16.13■□□□□ 0.17
LTBP3-221ENST00000532932 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 HDAC9Q9UKV0 1011 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 CACNA1SQ13698 1873 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 BCL9O00512 1426 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 TRIM37O94972 964 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 CLSTN1O94985 981 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 SHBGP04278 402 aa16.13■□□□□ 0.17
LTBP3-221ENST00000532932 MMEP08473 750 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms