RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
SSH3-210ENST00000532881 HDAC9Q9UKV0 1011 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 AKAP3O75969 853 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 ICA1Q05084 483 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
SSH3-210ENST00000532881 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 ETNPPLQ8TBG4 499 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 ARL8AQ96BM9 186 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 RPGRIP1Q96KN7 1286 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 NFU1Q9UMS0 254 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 OPLAHO14841 1288 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 SERPING1P05155 500 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 AARSP49588 968 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSH3-210ENST00000532881 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 ZC2HC1CQ53FD0 456 aaPredicted RBP16.38■□□□□ 0.21
SSH3-210ENST00000532881 ZNF571Q7Z3V5 609 aaPredicted RBP16.38■□□□□ 0.21
SSH3-210ENST00000532881 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
SSH3-210ENST00000532881 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
SSH3-210ENST00000532881 A0A1W2PRG0 241 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 PJA2O43164 708 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 KRT14P02533 472 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 ECE1P42892 770 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 COG2Q14746 738 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 HYIQ5T013 277 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 C8orf74Q6P047 294 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
SSH3-210ENST00000532881 KLHL7Q8IXQ5 586 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 KRT12Q99456 494 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 GANQ9H2C0 597 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 EPB41L5Q9HCM4 733 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 TULP2O00295 520 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 MSH4O15457 936 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 NDUFB10O96000 172 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 TUBBP07437 444 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 TCP1P17987 556 aaKnown RBP16.37■□□□□ 0.21
SSH3-210ENST00000532881 GUCY2DQ02846 1103 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 COL23A1Q86Y22 540 aaPredicted RBP16.37■□□□□ 0.21
SSH3-210ENST00000532881 VIPAS39Q9H9C1 493 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 STIM2Q9P246 746 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 SCAF8Q9UPN6 1271 aaKnown RBP16.37■□□□□ 0.21
SSH3-210ENST00000532881 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
SSH3-210ENST00000532881 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
SSH3-210ENST00000532881 GRID2IPA4D2P6 1211 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 GH2P01242 217 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
SSH3-210ENST00000532881 SLC18A3Q16572 532 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 ACBD3Q9H3P7 528 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 KDM3AQ9Y4C1 1321 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 SSU72P8A0A1W2PR75 194 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 MYO1CO00159 1063 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 GCNT3O95395 438 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
SSH3-210ENST00000532881 NMT1P30419 496 aaKnown RBP16.36■□□□□ 0.21
SSH3-210ENST00000532881 ASIC2Q16515 512 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 DPY19L2P1Q6NXN4 242 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 ABCB11O95342 1321 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 PCNTO95613 3336 aa16.36■□□□□ 0.21
SSH3-210ENST00000532881 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 CETN3O15182 167 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 NAB2Q15742 525 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 HHIPL2Q6UWX4 724 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
SSH3-210ENST00000532881 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
SSH3-210ENST00000532881 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 LTBP1Q14766 1721 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 GOLGA6CA6NDK9 693 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 HEXIM1O94992 359 aaKnown RBP16.35■□□□□ 0.21
SSH3-210ENST00000532881 MMP10P09238 476 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 GOLGA6DP0CG33 693 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 UCHL3P15374 230 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 PON1P27169 355 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
SSH3-210ENST00000532881 USP11P51784 963 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 PLS1Q14651 629 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 CRYGNQ8WXF5 182 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 SPAG5Q96R06 1193 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 AP1M1Q9BXS5 423 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 GOLGA6AQ9NYA3 693 aa16.35■□□□□ 0.21
SSH3-210ENST00000532881 RRP15Q9Y3B9 282 aaKnown RBP16.35■□□□□ 0.21
SSH3-210ENST00000532881 SPDYE3A6NKU9 549 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 CFBP00751 764 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 MCM3P25205 808 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 ZNF76P36508 570 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 KNOP1Q1ED39 458 aaKnown RBP16.34■□□□□ 0.21
SSH3-210ENST00000532881 TTMPQ5BVD1 217 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 IQCEQ6IPM2 695 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 CCDC70Q6NSX1 233 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms