RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CSF2RAP15509 400 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 GJB2P29033 226 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 STAT5BP51692 787 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 CCL23P55773 120 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 KRT76Q01546 638 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 PTK7Q13308 1070 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 C9orf50Q5SZB4 431 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 GLG1Q92896 1179 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 SNX21Q969T3 373 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 UNC45AQ9H3U1 944 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 VAV3Q9UKW4 847 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 ZNF215Q9UL58 517 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 PCDHA10Q9Y5I2 948 aa15.77■□□□□ 0.12
TSPAN4-220ENST00000532375 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 C17orf102A2RUQ5 167 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 MBLAC1A4D2B0 266 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 TBX3O15119 743 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 IQCF3P0C7M6 154 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 INSRRP14616 1297 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 MARK3P27448 753 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 FPGSQ05932 587 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 SPIRE1Q08AE8 756 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 SHHQ15465 462 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 SCLYQ96I15 445 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 FAM20AQ96MK3 541 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 TEKT3Q9BXF9 490 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 DISC1Q9NRI5 854 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 TANC1Q9C0D5 1861 aa15.76■□□□□ 0.11
TSPAN4-220ENST00000532375 NRCAMQ92823 1304 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 ZBTB42B2RXF5 422 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 EML1O00423 815 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 ZNF862O60290 1169 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 GAS7O60861 476 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 STBD1O95210 358 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 CKBP12277 381 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 SLC26A2P50443 739 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 TOB1P50616 345 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 SAFBQ15424 915 aaKnown RBP eCLIP15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 TMEM240Q5SV17 173 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 MIS18BP1Q6P0N0 1132 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 NOSTRINQ8IVI9 506 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 TDHQ8IZJ6 230 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 ZNF302Q9NR11 478 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 EVPLQ92817 2033 aa15.75■□□□□ 0.11
TSPAN4-220ENST00000532375 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 WDR64B1ANS9 1081 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 ACRP10323 421 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 PPFIA1Q13136 1202 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 PPP2R5CQ13362 524 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 BFSP2Q13515 415 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 MBTPS1Q14703 1052 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 GRIK4Q16099 956 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 TMEM199Q8N511 208 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 RDM1Q8NG50 284 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 ATP8B4Q8TF62 1192 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 ZBTB10Q96DT7 871 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.74■□□□□ 0.112e-12■□□□□ 9.2
TSPAN4-220ENST00000532375 TMEM60Q9H2L4 133 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 AZI2Q9H6S1 392 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 IL23AQ9NPF7 189 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 GABBR1Q9UBS5 961 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 SMC3Q9UQE7 1217 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 NOD1Q9Y239 953 aa15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-220ENST00000532375 LAMA2P24043 3122 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 POTEB3A0JP26 581 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 BACH1O14867 736 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 PSAPP07602 524 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 SFNP31947 248 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 PPIGQ13427 754 aaKnown RBP eCLIP15.73■□□□□ 0.114e-9■■□□□ 14.1
TSPAN4-220ENST00000532375 UGCGQ16739 394 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 ZNF618Q5T7W0 954 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 FAM160B1Q5W0V3 765 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 PDXDC2PQ6P474 469 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 POTEBQ6S5H4 581 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 RUFY4Q6ZNE9 571 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 RPAINQ86UA6 219 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 TRAPPC12Q8WVT3 735 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 OSBPL7Q9BZF2 842 aa15.73■□□□□ 0.11
TSPAN4-220ENST00000532375 RRN3P2A6NIE6 340 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 K7ELQ4 463 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 SOX1O00570 391 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 CHMP2AO43633 222 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 HBP1O60381 514 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 NBNO60934 754 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 GNAT1P11488 350 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 SELPP16109 830 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms