RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
NXF1-213ENST00000532297 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 RHBDL3P58872 404 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 AMPD3Q01432 767 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 LRIG3Q6UXM1 1119 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 DPP8Q6V1X1 898 aaPredicted RBP16.29■□□□□ 0.2
NXF1-213ENST00000532297 KIRREL3Q8IZU9 778 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 SNX29Q8TEQ0 813 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 SPZ1Q9BXG8 430 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 GRID2IPA4D2P6 1211 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
NXF1-213ENST00000532297 ARID5AQ03989 594 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 IFFO1Q0D2I5 559 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
NXF1-213ENST00000532297 GBP2P32456 591 aaPredicted RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 RFC4P35249 363 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 TNNC1P63316 161 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 EHHADHQ08426 723 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 MYH7BA7E2Y1 1941 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 GNA11P29992 359 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 PPP1R2P41236 205 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 ZNF844Q08AG5 666 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 XRCC4Q13426 336 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 NAA25Q14CX7 972 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 SV2BQ7L1I2 683 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 BAP1Q92560 729 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 DDX12PQ92771 950 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
NXF1-213ENST00000532297 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
NXF1-213ENST00000532297 H0YGN5 161 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 SNAP25P60880 206 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 PPP2R2AP63151 447 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 BYSLQ13895 437 aaKnown RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 GKAP1Q5VSY0 366 aaPredicted RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 TLDC1Q6P9B6 456 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 KCTD1Q719H9 257 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 TRIM6Q9C030 488 aaPredicted RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 ISCUQ9H1K1 167 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 NFS1Q9Y697 457 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 BIRC3Q13489 604 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 UAP1Q16222 522 aaPredicted RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 LACTB2Q53H82 288 aaPredicted RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 TBC1D31Q96DN5 1066 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 CNOT8Q9UFF9 292 aaKnown RBP16.27■□□□□ 0.2
NXF1-213ENST00000532297 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
NXF1-213ENST00000532297 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 SCNN1DP51172 638 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 GSTO1P78417 241 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 PDXDC1Q6P996 788 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 USP38Q8NB14 1042 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 NOVA2Q9UNW9 492 aaKnown RBP16.26■□□□□ 0.19
NXF1-213ENST00000532297 C5orf60A6NFR6 353 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 MGRN1O60291 552 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 STAT3P40763 770 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 PPP4CP60510 307 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
NXF1-213ENST00000532297 TBC1D22AQ8WUA7 517 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 UBLCP1Q8WVY7 318 aaPredicted RBP16.26■□□□□ 0.19
NXF1-213ENST00000532297 TATDN2Q93075 761 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 LRRC45Q96CN5 670 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 SSU72P8A0A1W2PR75 194 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 E9PMD0 336 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 ECHS1P30084 290 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 ADCY7P51828 1080 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 GTF2IP78347 998 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 HGSNATQ68CP4 663 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■■■■■ 27.2
NXF1-213ENST00000532297 CCT6BQ92526 530 aa16.26■□□□□ 0.19
NXF1-213ENST00000532297 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms