RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRPHP41219 470 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 TECP42680 631 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 SLC26A2P50443 739 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 NUCB2P80303 420 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 PTPN11Q06124 597 aaPredicted RBP25.06■■□□□ 1.6
LRRK1-208ENST00000532029 SPIRE1Q08AE8 756 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 EPHA7Q15375 998 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 TRIM60Q495X7 471 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 TNPO1Q92973 898 aaKnown RBP25.06■■□□□ 1.6
LRRK1-208ENST00000532029 RAB34Q9BZG1 259 aa25.06■■□□□ 1.6
LRRK1-208ENST00000532029 EML1O00423 815 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 PQBP1O60828 265 aaKnown RBP25.05■■□□□ 1.6
LRRK1-208ENST00000532029 CDK7P50613 346 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 DTHD1Q6ZMT9 781 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 CKAP2LQ8IYA6 745 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 PPP1R13LQ8WUF5 828 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 ATP6V0A1Q93050 837 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 CLIC4Q9Y696 253 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 SCN10AQ9Y5Y9 1956 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 BRCA2P51587 3418 aa25.05■■□□□ 1.6
LRRK1-208ENST00000532029 DCDC2CA8MYV0 355 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 TLR3O15455 904 aaKnown RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 FXR2P51116 673 aaKnown RBP eCLIP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 CEBPZQ03701 1054 aaKnown RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 FOXD4L6Q3SYB3 417 aaPredicted RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 ARL6IP4Q66PJ3 421 aaKnown RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 FOXD4L3Q6VB84 417 aaPredicted RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 DPF3Q92784 378 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 USP28Q96RU2 1077 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 FTOQ9C0B1 505 aaKnown RBP eCLIP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 RNPEPQ9H4A4 650 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 HDAC6Q9UBN7 1215 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 TRPC6Q9Y210 931 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 MAFBQ9Y5Q3 323 aaPredicted RBP25.04■■□□□ 1.6
LRRK1-208ENST00000532029 IGSF9BQ9UPX0 1349 aa25.04■■□□□ 1.6
LRRK1-208ENST00000532029 POTEMA6NI47 508 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 SMIM10L2AP0DMW4 78 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 SMIM10L2BP0DMW5 78 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 TLE2Q04725 743 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 PLCB4Q15147 1175 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 ANKRD33Q7Z3H0 272 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 SESTD1Q86VW0 696 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 ERMNQ8TAM6 284 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 ZDHHC9Q9Y397 364 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 ATP6V1DQ9Y5K8 247 aa25.03■■□□□ 1.6
LRRK1-208ENST00000532029 POTEB3A0JP26 581 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 DKC1O60832 514 aaKnown RBP eCLIP25.02■■□□□ 1.6
LRRK1-208ENST00000532029 P4HBP07237 508 aaKnown RBP25.02■■□□□ 1.6
LRRK1-208ENST00000532029 PSMC5P62195 406 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 POTEBQ6S5H4 581 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 BANK1Q8NDB2 785 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 FAM167AQ96KS9 214 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 TOX2Q96NM4 488 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 GTF2IRD1Q9UHL9 959 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 NOD1Q9Y239 953 aa25.02■■□□□ 1.6
LRRK1-208ENST00000532029 C17orf102A2RUQ5 167 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 EVI5O60447 810 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 GNAT1P11488 350 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 DDIT3P35638 169 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 QARSP47897 775 aaKnown RBP25.01■■□□□ 1.59
LRRK1-208ENST00000532029 PPFIA1Q13136 1202 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 PDIA5Q14554 519 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 UGCGQ16739 394 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 ATL3Q6DD88 541 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 FAM126BQ8IXS8 530 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 NEK9Q8TD19 979 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 ATP8B4Q8TF62 1192 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 DYDC2Q96IM9 177 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 EIF2AK1Q9BQI3 630 aaKnown RBP25.01■■□□□ 1.59
LRRK1-208ENST00000532029 LRWD1Q9UFC0 647 aa25.01■■□□□ 1.59
LRRK1-208ENST00000532029 VWA3AA6NCI4 1184 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 HBP1O60381 514 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 PRKCEQ02156 737 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 STK38Q15208 465 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 PTPAQ15257 358 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 TRMT1LQ7Z2T5 733 aaKnown RBP25■■□□□ 1.59
LRRK1-208ENST00000532029 C7orf61Q8IZ16 206 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 BBXQ8WY36 941 aaPredicted RBP25■■□□□ 1.59
LRRK1-208ENST00000532029 NRBP2Q9NSY0 501 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 RGL1Q9NZL6 768 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 TFIP11Q9UBB9 837 aaKnown RBP25■■□□□ 1.59
LRRK1-208ENST00000532029 STK24Q9Y6E0 443 aa25■■□□□ 1.59
LRRK1-208ENST00000532029 OATP04181 439 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 ATP4AP20648 1035 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 NASPP49321 788 aaPredicted RBP24.99■■□□□ 1.59
LRRK1-208ENST00000532029 CYP4A11Q02928 519 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 IL17AQ16552 155 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 PTGISQ16647 500 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 HAUS3Q68CZ6 603 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 GDF6Q6KF10 455 aaPredicted RBP24.99■■□□□ 1.59
LRRK1-208ENST00000532029 IGSF22Q8N9C0 903 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 NRCAMQ92823 1304 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 LXNQ9BS40 222 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 TRPV6Q9H1D0 765 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 ZSWIM4Q9H7M6 989 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 TRMT13Q9NUP7 481 aaKnown RBP24.99■■□□□ 1.59
LRRK1-208ENST00000532029 SETD4Q9NVD3 440 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 CFAP45Q9UL16 551 aa24.99■■□□□ 1.59
LRRK1-208ENST00000532029 CIZ1Q9ULV3 898 aaPredicted RBP24.99■■□□□ 1.59
LRRK1-208ENST00000532029 MYH15Q9Y2K3 1946 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms