RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 HOOK2Q96ED9 719 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 EPSTI1Q96J88 318 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 TMEM87BQ96K49 555 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 TBC1D32Q96NH3 1257 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 NEK1Q96PY6 1258 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 FERD3LQ96RJ6 166 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 OSBPL10Q9BXB5 764 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 SRRTQ9BXP5 876 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 PDGFDQ9GZP0 370 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 ALDH8A1Q9H2A2 487 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 KIF9Q9HAQ2 790 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 ATP6V0A4Q9HBG4 840 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 PCDH18Q9HCL0 1135 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 GMIPQ9P107 970 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 REV1Q9UBZ9 1251 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 TJP2Q9UDY2 1190 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 CIDEBQ9UHD4 219 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 ZNF148Q9UQR1 794 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 ZNF510Q9Y2H8 683 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 TMA7Q9Y2S6 64 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 INSRP06213 1382 aa5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 SCAF11Q99590 1463 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-221ENST00000531582 SETD1BQ9UPS6 1966 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 FHAD1B1AJZ9 1412 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CNTLNQ9NXG0 1405 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 TMEM94Q12767 1356 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 HMX2A2RU54 273 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 EME2A4GXA9 379 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 GRIN3BO60391 1043 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 MGEA5O60502 916 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 NEMFO60524 1076 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 ATF4P18848 351 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CYP7A1P22680 504 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 SLC8A1P32418 973 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 TNNI2P48788 182 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CLNS1AP54105 237 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CHMP4BP1P59074 171 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBA4AP68366 448 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 MECOMQ03112 1051 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 IKQ13123 557 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CUL3Q13618 768 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 SLBPQ14493 270 aaKnown RBP eCLIP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 MYBPC3Q14896 1274 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 NFE2L2Q16236 605 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 TRIM71Q2Q1W2 868 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 NAALADL2Q58DX5 795 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CREB3L3Q68CJ9 461 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 INTS3Q68E01 1043 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 THOC7Q6I9Y2 204 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 GK5Q6ZS86 529 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 NEK10Q6ZWH5 1172 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 LURAP1LQ8IV03 231 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 RPAP2Q8IXW5 612 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 RBBP8NLQ8NC74 664 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 MSANTD4Q8NCY6 345 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 FAM13CQ8NE31 585 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 PPP1R14CQ8TAE6 165 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 ACSF2Q96CM8 615 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 GMLQ99445 158 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 TINF2Q9BSI4 451 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 SLC7A5P2Q9GIP4 190 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 C1GALT1Q9NS00 363 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 UBAP1Q9NZ09 502 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 GTF2IRD1Q9UHL9 959 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 ZNRF3Q9ULT6 936 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 EFR3BQ9Y2G0 817 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 CARD8Q9Y2G2 431 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 DAAM1Q9Y4D1 1078 aa5.35□□□□□ -1.55
ECHDC1-221ENST00000531582 MEIS3P2A8K0S8 358 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 DIAPH1O60610 1272 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 FOSP01100 380 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC166P0CW27 439 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 HSPA1AP0DMV8 641 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 HSPA1BP0DMV9 641 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CD9P21926 228 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CLCQ05315 142 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBA3CQ13748 450 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 PLCB4Q15147 1175 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 RASA2Q15283 850 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 TAF11Q15544 211 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CDCP2Q5VXM1 449 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 C11orf74Q86VG3 221 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CEP57L1Q8IYX8 460 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 LRRC43Q8N309 656 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 GALNT15Q8N3T1 639 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 TAB3Q8N5C8 712 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 RASSF8Q8NHQ8 419 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 EXOC6Q8TAG9 804 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC110Q8TBZ0 833 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 SMARCE1Q969G3 411 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 C8orf76Q96K31 380 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC74BQ96LY2 380 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 PSMG3-AS1Q96PY0 264 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
ECHDC1-221ENST00000531582 JPH2Q9BR39 696 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms