RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 SWSAP1Q6NVH7 229 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 DEFB128Q7Z7B8 93 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 ETNPPLQ8TBG4 499 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
RELA-216ENST00000531238 CXXC1Q9P0U4 656 aaPredicted RBP18.4■□□□□ 0.54
RELA-216ENST00000531238 CCDC194A0A1B0GVG4 234 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 ST18O60284 1047 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 PSMD10O75832 226 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 FGBP02675 491 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 INSRRP14616 1297 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 FAM109BQ6ICB4 259 aaPredicted RBP18.39■□□□□ 0.53
RELA-216ENST00000531238 ZNF746Q6NUN9 644 aaPredicted RBP18.39■□□□□ 0.53
RELA-216ENST00000531238 MOXD1Q6UVY6 613 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 B3GNT9Q6UX72 402 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
RELA-216ENST00000531238 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
RELA-216ENST00000531238 UNC45AQ9H3U1 944 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 NRCAMQ92823 1304 aa18.39■□□□□ 0.53
RELA-216ENST00000531238 NBNO60934 754 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 SELPP16109 830 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 GRIK4Q16099 956 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
RELA-216ENST00000531238 AFAP1L1Q8TED9 768 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 HERVK_113Q902F9 699 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 RIT2Q99578 217 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 AZI2Q9H6S1 392 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
RELA-216ENST00000531238 MAFBQ9Y5Q3 323 aaPredicted RBP18.38■□□□□ 0.53
RELA-216ENST00000531238 SCN5AQ14524 2016 aa18.38■□□□□ 0.53
RELA-216ENST00000531238 CDH23Q9H251 3354 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 GRXCR1A8MXD5 290 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 CCNT1O60563 726 aaKnown RBP18.37■□□□□ 0.53
RELA-216ENST00000531238 THPOP40225 353 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 LRCH2Q5VUJ6 765 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 MIS18BP1Q6P0N0 1132 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 LRRC8DQ7L1W4 858 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 TRAPPC12Q8WVT3 735 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 HAS1Q92839 578 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 KCNMB3Q9NPA1 279 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 ZNF302Q9NR11 478 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 PCDHA10Q9Y5I2 948 aa18.37■□□□□ 0.53
RELA-216ENST00000531238 MBLAC1A4D2B0 266 aaPredicted RBP18.36■□□□□ 0.53
RELA-216ENST00000531238 BACH1O14867 736 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 GNAT1P11488 350 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 RFC2P35250 354 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 IGBP1P78318 339 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 KRT76Q01546 638 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 PSRC1Q6PGN9 363 aaPredicted RBP18.36■□□□□ 0.53
RELA-216ENST00000531238 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 TET1Q8NFU7 2136 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 C8orf76Q96K31 380 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 DISC1Q9NRI5 854 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 GABBR1Q9UBS5 961 aa18.36■□□□□ 0.53
RELA-216ENST00000531238 POTEB3A0JP26 581 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 ZBTB42B2RXF5 422 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 CHMP2AO43633 222 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 ZNF862O60290 1169 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 GAS7O60861 476 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 CXCL10P02778 98 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
RELA-216ENST00000531238 TRIM29Q14134 588 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 UGCGQ16739 394 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 PDXDC2PQ6P474 469 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 POTEBQ6S5H4 581 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
RELA-216ENST00000531238 TEKT3Q9BXF9 490 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 TRPC6Q9Y210 931 aa18.35■□□□□ 0.53
RELA-216ENST00000531238 CHD9Q3L8U1 2897 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 RRN3P2A6NIE6 340 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 EML1O00423 815 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 CHRNA1P02708 482 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 PSAPP07602 524 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 SLC26A2P50443 739 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 FAM160B1Q5W0V3 765 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 Q7L0L9 218 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 IL27Q8NEV9 243 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 ATP8B4Q8TF62 1192 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 DNAJB3Q8WWF6 145 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 FTOQ9C0B1 505 aaKnown RBP eCLIP18.34■□□□□ 0.53
RELA-216ENST00000531238 BRMS1Q9HCU9 246 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
RELA-216ENST00000531238 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.33■□□□□ 0.52
RELA-216ENST00000531238 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.33■□□□□ 0.52
RELA-216ENST00000531238 WDR64B1ANS9 1081 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 HBP1O60381 514 aa18.33■□□□□ 0.52
RELA-216ENST00000531238 STBD1O95210 358 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms