RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PRPSAP1Q14558 356 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 HAUS3Q68CZ6 603 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TMC5Q6UXY8 1006 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 XAGE3Q8WTP9 111 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 PPP2R3CQ969Q6 453 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 EIF3CQ99613 913 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TMEM60Q9H2L4 133 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 BICC1Q9H694 974 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 HAUS4Q9H6D7 363 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM39Q9HCM9 518 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 NDE1Q9NXR1 346 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 KIF17Q9P2E2 1029 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 ZBTB21Q9ULJ3 1066 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 L3MBTL1Q9Y468 752 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 VWA3AA6NCI4 1184 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 MANSC4A6NHS7 340 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TOM1L1O75674 476 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TSPAN9O75954 239 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 MT-ND3P03897 115 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 LDHBP07195 334 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 NSFP46459 744 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TTC6Q86TZ1 520 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 U2AF1L4Q8WU68 220 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 GBA2Q9HCG7 927 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 ASAP1Q9ULH1 1129 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 ZNF148Q9UQR1 794 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TRAF3IP3Q9Y228 551 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 STK24Q9Y6E0 443 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 KDM5AP29375 1690 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 AHDC1Q5TGY3 1603 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 NLRP12P59046 1061 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 ITKQ08881 620 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CTTNQ14247 550 aaKnown RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 C1orf146Q5VVC0 180 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 OLFML2BQ68BL8 750 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CDH24Q86UP0 819 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TRIML1Q8N9V2 468 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CATSPER1Q8NEC5 780 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 MTRQ99707 1265 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CARD9Q9H257 536 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 FAM96AQ9H5X1 160 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 ARHGEF3Q9NR81 526 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 NFE2L3Q9Y4A8 694 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 STAT1P42224 750 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 RINT1Q6NUQ1 792 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 RRAGAQ7L523 313 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 CDAN1Q8IWY9 1227 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 OR8K1Q8NGG5 319 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 SPATA17Q96L03 361 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 RPS6KC1Q96S38 1066 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM45Q9H8W5 580 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-229ENST00000531014 SNRKQ9NRH2 765 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 KCNH3Q9ULD8 1083 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 TPCN1Q9ULQ1 816 aa7.79□□□□□ -1.16
CTNND1-229ENST00000531014 PTPDC1A2A3K4 754 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 KRT87PA6NCN2 255 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 C16orf96A6NNT2 1141 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 KRT6AP02538 564 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 KRT6BP04259 564 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 SRGAP2BP0DMP2 458 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 P4HA1P13674 534 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 POLR2BP30876 1174 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 KRT6CP48668 564 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 KRR1Q13601 381 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PUM3Q15397 648 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 RGS9BPQ6ZS82 235 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM67Q6ZTA4 783 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 NOP9Q86U38 636 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TEX2Q8IWB9 1127 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ASPSCR1Q9BZE9 553 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ENO4A6NNW6 628 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 INAQ16352 499 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 MFSD14CQ5VZR4 134 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM69Q86WT6 500 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 SKAP1Q86WV1 359 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PARD3BQ8TEW8 1205 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CALR3Q96L12 384 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CXorf56Q9H5V9 222 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ARHGEF10LQ9HCE6 1279 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 G3BP2Q9UN86 482 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ANGEL1Q9UNK9 670 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PRR36Q9H6K5 1346 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ASAP2O43150 1006 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ACTN1P12814 892 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PSMA3P25788 255 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 HIBADHP31937 336 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 AARSP49588 968 aaKnown RBP eCLIP7.78□□□□□ -1.163e-6■□□□□ 10.9
CTNND1-229ENST00000531014 FKBP1BP68106 108 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms