RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PROB1E7EW31 1015 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 CMTR2Q8IYT2 770 aaKnown RBP12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 DOCK5Q9H7D0 1870 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 KIAA1671Q9BY89 1806 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 CYTH3O43739 400 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 STAM2O75886 525 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 FOXK2Q01167 660 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 KCNC3Q14003 757 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 RBM23Q86U06 439 aaKnown RBP12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 PIGSQ96S52 555 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 S1PR5Q9H228 398 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 RTEL1Q9NZ71 1219 aa12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 ZNF215Q9UL58 517 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-210ENST00000530563 GSTTP1A0A1W2PQM5 241 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 H0Y858 1186 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 FIBPO43427 364 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 ATP9AO75110 1047 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 SDSP20132 328 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 CD52P31358 61 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 GATMP50440 423 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 PTPN21Q16825 1174 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 GNPTABQ3T906 1256 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 NPAS4Q8IUM7 802 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 CDY2AQ9Y6F7 541 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 LAMA4Q16363 1823 aa12.34□□□□□ -0.43
TM9SF1-210ENST00000530563 PER2O15055 1255 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 GRIK4Q16099 956 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 PPP2R3CQ969Q6 453 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
TM9SF1-210ENST00000530563 PLXNA4Q9HCM2 1894 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 FSCN2O14926 492 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 KCNA2P16389 499 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 TCF7P36402 384 aaPredicted RBP12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 NUBP1P53384 320 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 ERVFC1P60507 584 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 MRPS6P82932 125 aaKnown RBP12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 SP4Q02446 784 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 GRM4Q14833 912 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 DUSP6Q16828 381 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 SYCE2Q6PIF2 218 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 RIPOR3Q96MK2 946 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 KRT23Q9C075 422 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 TLE6Q9H808 572 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 SENP2Q9HC62 589 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
TM9SF1-210ENST00000530563 PRR23AA6NEV1 266 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 MEIS2O14770 477 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 NBL1P41271 181 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 TROAPQ12815 778 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 PCYT2Q99447 389 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
TM9SF1-210ENST00000530563 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 SCG2P13521 617 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 INSRRP14616 1297 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 ITGB5P18084 799 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 MARK3P27448 753 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 UBE3AQ05086 875 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 TRAF1Q13077 416 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 TMEM105Q8N8V8 129 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 SEPT1Q8WYJ6 367 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms