RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ASTE1Q2TB18 679 aaPredicted RBP15.55■□□□□ 0.08
USP48-213ENST00000529637 CACNA2D4Q7Z3S7 1137 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 RAPGEF5Q92565 580 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 GCOM1H8Y6P7 765 aaPredicted RBP15.55■□□□□ 0.08
USP48-213ENST00000529637 TOM1O60784 492 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 MYZAPP0CAP1 466 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 RHBDL3P58872 404 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 BAP1Q92560 729 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 NDST4Q9H3R1 872 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 NLRC4Q9NPP4 1024 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 POLLQ9UGP5 575 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 RTN2O75298 545 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 HSPA9P38646 679 aaKnown RBP15.55■□□□□ 0.08
USP48-213ENST00000529637 GRB10Q13322 594 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 TDRD12Q587J7 1177 aaKnown RBP15.55■□□□□ 0.08
USP48-213ENST00000529637 ODF2Q5BJF6 829 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 TTBK2Q6IQ55 1244 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 DNAAF5Q86Y56 855 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 MDM1Q8TC05 714 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 ACTR5Q9H9F9 607 aaPredicted RBP15.55■□□□□ 0.08
USP48-213ENST00000529637 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
USP48-213ENST00000529637 CASZ1Q86V15 1759 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 PJA2O43164 708 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 KLRC1P26715 233 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 DRP2Q13474 957 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 HGSNATQ68CP4 663 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 PACSIN1Q9BY11 444 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 RREB1Q92766 1687 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 LAMB1P07942 1786 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 DLEC1Q9Y238 1755 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 RGL2O15211 777 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 NT5C2P49902 561 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 NAA25Q14CX7 972 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 LRCH2Q5VUJ6 765 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 TBC1D16Q8TBP0 767 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 WHAMMQ8TF30 809 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 INPP4AQ96PE3 977 aaPredicted RBP15.54■□□□□ 0.08
USP48-213ENST00000529637 MTMR4Q9NYA4 1195 aa15.54■□□□□ 0.08
USP48-213ENST00000529637 NOVA2Q9UNW9 492 aaKnown RBP15.54■□□□□ 0.08
USP48-213ENST00000529637 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 GOLGA6L10A6NI86 522 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 EZRP15311 586 aaKnown RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 CDC25CP30307 473 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 CTNNA1P35221 906 aaKnown RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 GLIS3Q8NEA6 775 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 DDX12PQ92771 950 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 BLOC1S4Q9NUP1 217 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 SNED1Q8TER0 1413 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 DOK7Q18PE1 504 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 NELFCDQ8IXH7 590 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 HVCN1Q96D96 273 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 TSG101Q99816 390 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 PLCB1Q9NQ66 1216 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 BAIAP2L1Q9UHR4 511 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 COL5A3P25940 1745 aaPredicted RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 TRAF5O00463 557 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 TLR2O60603 784 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 KRT18P05783 430 aaKnown RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 PDE6BP35913 854 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 PPP1R2P41236 205 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 CCT6BQ92526 530 aa15.53■□□□□ 0.08
USP48-213ENST00000529637 TAF1DQ9H5J8 278 aaPredicted RBP15.53■□□□□ 0.08
USP48-213ENST00000529637 ELF3P78545 371 aaPredicted RBP15.52■□□□□ 0.08
USP48-213ENST00000529637 ARID5AQ03989 594 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 XRCC4Q13426 336 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 CRYMQ14894 314 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 HIBCHQ6NVY1 386 aaPredicted RBP15.52■□□□□ 0.08
USP48-213ENST00000529637 UNC13DQ70J99 1090 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 KCNK18Q7Z418 384 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 CACNA2D3Q8IZS8 1091 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 STAMBPL1Q96FJ0 436 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 THOC1Q96FV9 657 aaKnown RBP15.52■□□□□ 0.08
USP48-213ENST00000529637 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 AP1M1Q9BXS5 423 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 KANSL2Q9H9L4 492 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 BMP2KQ9NSY1 1161 aaPredicted RBP15.52■□□□□ 0.08
USP48-213ENST00000529637 USP40Q9NVE5 1235 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 DDX25Q9UHL0 483 aaKnown RBP15.52■□□□□ 0.08
USP48-213ENST00000529637 L3MBTL1Q9Y468 752 aa15.52■□□□□ 0.08
USP48-213ENST00000529637 MGRN1O60291 552 aa15.52■□□□□ 0.07
USP48-213ENST00000529637 FGFR1OPO95684 399 aaKnown RBP15.52■□□□□ 0.07
USP48-213ENST00000529637 CCNHP51946 323 aaPredicted RBP15.52■□□□□ 0.07
USP48-213ENST00000529637 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
USP48-213ENST00000529637 ASPRV1Q53RT3 343 aa15.52■□□□□ 0.07
USP48-213ENST00000529637 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.07
USP48-213ENST00000529637 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.07
USP48-213ENST00000529637 NRAPQ86VF7 1730 aa15.52■□□□□ 0.07
USP48-213ENST00000529637 GBP2P32456 591 aaPredicted RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 C1orf131Q8NDD1 294 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms