RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, human

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMBRA1-208	ENST00000529558	KCNK3	O14649	394 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SLC26A4	O43511	780 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	GAS2	O43903	313 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	NDUFS2	O75306	463 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	ALX3	O95076	343 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TBC1D8	O95759	1140 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SYP	P08247	313 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SLURP2	P0DP57	97 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	GNAT1	P11488	350 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	ELN	P15502	786 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	FXR1	P51114	621 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	RENBP	P51606	427 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SRSF2	Q01130	221 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	KRT76	Q01546	638 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SPIRE1	Q08AE8	756 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TRIM28	Q13263	835 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SGO2	Q562F6	1265 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TOR2A	Q5JU69	321 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DUSP27	Q5VZP5	1158 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	ESRP1	Q6NXG1	681 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DARS2	Q6PI48	645 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	USP45	Q70EL2	814 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PTRH1	Q86Y79	214 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MYLK4	Q86YV6	388 aa	Predicted RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	KIAA0319L	Q8IZA0	1049 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CAMKK1	Q8N5S9	505 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	GIMAP7	Q8NHV1	300 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DPF3	Q92784	378 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	COA7	Q96BR5	231 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MVB12A	Q96EY5	273 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TRIM11	Q96F44	468 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	FAM46A	Q96IP4	442 aa	Known RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SLC2A13	Q96QE2	648 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TBCB	Q99426	244 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CEP41	Q9BYV8	373 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	BHMT2	Q9H2M3	363 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	AP5S1	Q9NUS5	200 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SERPINB13	Q9UIV8	391 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TUBD1	Q9UJT1	453 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CAPN6	Q9Y6Q1	641 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	RPS6KL1	Q9Y6S9	549 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DGKB	Q9Y6T7	804 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SCIN	Q9Y6U3	715 aa		4.37	□□□□□ -1.71
AMBRA1-208	ENST00000529558	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	GOLIM4	O00461	696 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MAN2B1	O00754	1011 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	NKRF	O15226	690 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MAFG	O15525	162 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	HIP1R	O75146	1068 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	UBXN7	O94888	489 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	COL6A2	P12110	1019 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	OSM	P13725	252 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	RXRB	P28702	533 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PCBP3	P57721	371 aa	Known RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	BTK	Q06187	659 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	BIRC3	Q13489	604 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	HSF5	Q4G112	596 aa	Predicted RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CT83	Q5H943	113 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558		Q6ZS46	218 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CEP68	Q76N32	757 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	OTOP3	Q7RTS5	596 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SAPCD2	Q86UD0	394 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	NLRP10	Q86W26	655 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DENND1C	Q8IV53	801 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	STK11IP	Q8N1F8	1099 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	DEPTOR	Q8TB45	409 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SH3RF2	Q8TEC5	729 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	RTF1	Q92541	710 aa	Known RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	C16orf92	Q96LL3	132 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	HEXIM2	Q96MH2	286 aa	Known RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	UBL7	Q96S82	380 aa	Predicted RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PLVAP	Q9BX97	442 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	ZHX3	Q9H4I2	956 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	AKTIP	Q9H8T0	292 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	AS3MT	Q9HBK9	375 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	USP36	Q9P275	1121 aa	Known RBP	4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PGAP2	Q9UHJ9	254 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MSRA	Q9UJ68	235 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	TCFL5	Q9UL49	500 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	POLH	Q9Y253	713 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	ZNF281	Q9Y2X9	895 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PCDHGB6	Q9Y5F9	930 aa		4.36	□□□□□ -1.71
AMBRA1-208	ENST00000529558	FAM95C	A0A1B0GW59	222 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	PRRT4	C9JH25	899 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SCD	O00767	359 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	B3GALT2	O43825	422 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	NPHS1	O60500	1241 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CLASP2	O75122	1294 aa	Known RBP	4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CELA2B	P08218	269 aa	Predicted RBP	4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	FAM87A	P0C7U9	286 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	SRGN	P10124	158 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MAP4	P27816	1152 aa	Known RBP	4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CCT5	P48643	541 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	AGFG1	P52594	562 aa	Known RBP	4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	CACNB3	P54284	484 aa		4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	MRPS9	P82933	396 aa	Known RBP	4.35	□□□□□ -1.71
AMBRA1-208	ENST00000529558	KIF23	Q02241	960 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms