RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FNIP1Q8TF40 1166 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 CPA5Q8WXQ8 436 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 PTPRTO14522 1441 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 SAMD9LQ8IVG5 1584 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 ITSN2Q9NZM3 1697 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 ABCA6Q8N139 1617 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 TCRBV16S1A1N1A0A5B0 115 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 POU3F2P20265 443 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 SLC6A11P48066 632 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 HTRA3P83110 453 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 CACNB2Q08289 660 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 TP53I13Q8NBR0 393 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 SMARCC2Q8TAQ2 1214 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 TRMT2BQ96GJ1 504 aaKnown RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 TMEM169Q96HH4 297 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 PDGFDQ9GZP0 370 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 CFDP1Q9UEE9 299 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-212ENST00000529046 CDC42BPAQ5VT25 1732 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 MTUS2Q5JR59 1369 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 CCNB3Q8WWL7 1395 aa6.81□□□□□ -1.32
CSDE1-212ENST00000529046 A0A0G2JLL6 359 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-212ENST00000529046 DNAJC8O75937 253 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-212ENST00000529046 CRTAMO95727 393 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 HNRNPMP52272 730 aaKnown RBP eCLIP6.8□□□□□ -1.32
CSDE1-212ENST00000529046 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 EMC4Q5J8M3 183 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 CEP162Q5TB80 1403 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 FGD2Q7Z6J4 655 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 XYLT2Q9H1B5 865 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 NDOR1Q9UHB4 597 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 COA3Q9Y2R0 106 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-212ENST00000529046 ZMYM3Q14202 1370 aa6.8□□□□□ -1.32
CSDE1-212ENST00000529046 MBD5Q9P267 1494 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 OTOL1A6NHN0 477 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-212ENST00000529046 SGSM2O43147 1006 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 CKMP06732 381 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 GRK2P25098 689 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 GRK3P35626 688 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 ETV3LQ6ZN32 361 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 CHAMP1Q96JM3 812 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 ORAI3Q9BRQ5 295 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 MAGEC2Q9UBF1 373 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-212ENST00000529046 PPARGC1AQ9UBK2 798 aaKnown RBP6.79□□□□□ -1.32
CSDE1-212ENST00000529046 MROH2AA6NES4 1674 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 A2MP01023 1474 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 IQSEC2Q5JU85 1478 aa6.79□□□□□ -1.32
CSDE1-212ENST00000529046 PLXNC1O60486 1568 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 SYCP2Q9BX26 1530 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 RASGRP1O95267 797 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 NPTXRO95502 500 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 SOD2P04179 222 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 ASLP04424 464 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 CYP2C8P10632 490 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 SDSP20132 328 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
CSDE1-212ENST00000529046 GYS2P54840 703 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 PAK1Q13153 545 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 NIM1KQ8IY84 436 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 SYT8Q8NBV8 401 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 PCDHA9Q9Y5H5 950 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 PCDHA8Q9Y5H6 950 aa6.78□□□□□ -1.32
CSDE1-212ENST00000529046 C3P01024 1663 aa6.77□□□□□ -1.32
CSDE1-212ENST00000529046 STRCQ7RTU9 1775 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 EHBP1L1Q8N3D4 1523 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 FAM135AQ9P2D6 1515 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 SH3D21A4FU49 640 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 TADA3O75528 432 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 C8BP07358 591 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 KCNC1P48547 511 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 SLURP1P55000 103 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 GUCY1A3Q02108 690 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 NFIXQ14938 502 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 CHRNA2Q15822 529 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 CYP4F22Q6NT55 531 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 ABHD17CQ6PCB6 329 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 LIPIQ6XZB0 460 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 MIB1Q86YT6 1006 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 ZDHHC14Q8IZN3 488 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 ADGRG2Q8IZP9 1017 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 DDX11Q96FC9 970 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms