RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 MEIS1O00470 390 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 NCK2O43639 380 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ATP9AO75110 1047 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 LGR5O75473 907 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ARHGEF15O94989 841 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 KCNA5P22460 613 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 CHMP4BP1P59074 171 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 PKN1Q16512 942 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 CEP55Q53EZ4 464 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-230ENST00000527949 FAM43BQ6ZT52 329 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ATP6V0A1Q93050 837 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-230ENST00000527949 ANO3Q9BYT9 981 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
NR1H3-230ENST00000527949 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 PRKAG3Q9UGI9 489 aa12.7□□□□□ -0.38
NR1H3-230ENST00000527949 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 DCXO43602 365 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 NBNO60934 754 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 AMHP03971 560 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 CPA1P15085 419 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 GNA11P29992 359 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 HIC1Q14526 733 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 FAM26DQ5JW98 314 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 ZNF618Q5T7W0 954 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 MRPL38Q96DV4 380 aaKnown RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 SMARCAD1Q9H4L7 1026 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 JPH1Q9HDC5 661 aaPredicted RBP12.69□□□□□ -0.38
NR1H3-230ENST00000527949 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 CYP46A1Q9Y6A2 500 aa12.69□□□□□ -0.38
NR1H3-230ENST00000527949 PRRC2BQ5JSZ5 2229 aaKnown RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 MBLAC1A4D2B0 266 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 ATG7O95352 703 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 SLC26A2P50443 739 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 ANAPC15P60006 121 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 DEFB103AP81534 67 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 ARHGAP4P98171 946 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 NEK9Q8TD19 979 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 WNT8BQ93098 351 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 UIMC1Q96RL1 719 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 CD320Q9NPF0 282 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
NR1H3-230ENST00000527949 TCF20Q9UGU0 1960 aaKnown RBP12.68□□□□□ -0.38
NR1H3-230ENST00000527949 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 TREHO43280 583 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 SORBS3O60504 671 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 CIITAP33076 1130 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 MRE11P49959 708 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-230ENST00000527949 PLEKHG4Q58EX7 1191 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 PLPPR4Q7Z2D5 763 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 TRIM50Q86XT4 487 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 REXO1Q8N1G1 1221 aaKnown RBP12.67□□□□□ -0.38
NR1H3-230ENST00000527949 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 POP1Q99575 1024 aaKnown RBP12.67□□□□□ -0.38
NR1H3-230ENST00000527949 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
NR1H3-230ENST00000527949 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-230ENST00000527949 MICAL3Q7RTP6 2002 aa12.67□□□□□ -0.38
NR1H3-230ENST00000527949 PIEZO1Q92508 2521 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 IGLV3-22A0A075B6J6 115 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 IGKV6D-21A0A0A0MT36 114 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 THPOP40225 353 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 SETQ01105 290 aaPredicted RBP12.66□□□□□ -0.38
NR1H3-230ENST00000527949 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
NR1H3-230ENST00000527949 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
NR1H3-230ENST00000527949 APBB2Q92870 758 aa12.66□□□□□ -0.38
NR1H3-230ENST00000527949 PABPC5Q96DU9 382 aaKnown RBP12.66□□□□□ -0.38
NR1H3-230ENST00000527949 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms