RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ESYT2A0FGR8 921 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 ADAMTS3O15072 1205 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 EFCAB14O75071 495 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 NLRP5P59047 1200 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 ACTR2P61160 394 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 ITGB3BPQ13352 177 aaPredicted RBP21.94■■□□□ 1.1
CAPN1-211ENST00000527739 GRIK4Q16099 956 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 MCTP2Q6DN12 878 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 CCDC148Q8NFR7 591 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 BICD2Q8TD16 824 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 RASGRP4Q8TDF6 673 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 TRPC6Q9Y210 931 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 NFASCO94856 1347 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 NID2Q14112 1375 aa21.94■■□□□ 1.1
CAPN1-211ENST00000527739 XIRP2A4UGR9 3374 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 CAND2O75155 1236 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 EVCP57679 992 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 MRPS5P82675 430 aaKnown RBP21.93■■□□□ 1.1
CAPN1-211ENST00000527739 TRIP12Q14669 1992 aaPredicted RBP21.93■■□□□ 1.1
CAPN1-211ENST00000527739 RUFY4Q6ZNE9 571 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 RSPH3Q86UC2 560 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 ADAMTS19Q8TE59 1207 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 SEPT8Q92599 483 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 PCYT2Q99447 389 aa21.93■■□□□ 1.1
CAPN1-211ENST00000527739 FAM86B1E9PN63 330 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 BACH1O14867 736 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 ARHGEF15O94989 841 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 FAM86B2P0C5J1 330 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 STAT5BP51692 787 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 ADAM17P78536 824 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 CPLX2Q6PUV4 134 aaKnown RBP21.92■■□□□ 1.1
CAPN1-211ENST00000527739 NIPA1Q7RTP0 329 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 ARNTL2Q8WYA1 636 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 TNPO1Q92973 898 aaKnown RBP21.92■■□□□ 1.1
CAPN1-211ENST00000527739 ZNF274Q96GC6 653 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-211ENST00000527739 TUBE1Q9UJT0 475 aa21.92■■□□□ 1.1
CAPN1-211ENST00000527739 EPOPA6NHQ4 379 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 RRN3P2A6NIE6 340 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 AMHP03971 560 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 CYP3A4P08684 503 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 INSRRP14616 1297 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 TAF2Q6P1X5 1199 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.91■■□□□ 1.1
CAPN1-211ENST00000527739 MYOCDQ8IZQ8 938 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 ZBTB10Q96DT7 871 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 ZNF577Q9BSK1 485 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 TCEAL9Q9UHQ7 104 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 TANC1Q9C0D5 1861 aa21.91■■□□□ 1.1
CAPN1-211ENST00000527739 TFF2Q03403 129 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 TAP1Q03518 808 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 PLCB4Q15147 1175 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 PRR16Q569H4 304 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 PLEKHG4Q58EX7 1191 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 PLPPR4Q7Z2D5 763 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 DNAJB3Q8WWF6 145 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 UHRF1Q96T88 793 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-211ENST00000527739 OSBPL7Q9BZF2 842 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 FAM49AQ9H0Q0 323 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-211ENST00000527739 DOCK5Q9H7D0 1870 aa21.9■■□□□ 1.1
CAPN1-211ENST00000527739 LCHNA4D1U4 455 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 IPO5O00410 1097 aaKnown RBP21.89■■□□□ 1.09
CAPN1-211ENST00000527739 GJB5O95377 273 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 CCNE2O96020 404 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 FAM160B1Q5W0V3 765 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 KRT40Q6A162 431 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 SPRED2Q7Z698 418 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 NECAB3Q96P71 396 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-211ENST00000527739 RAD9AQ99638 391 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 SH3GLB2Q9NR46 395 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 RAPGEFL1Q9UHV5 662 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 TET1Q8NFU7 2136 aa21.89■■□□□ 1.09
CAPN1-211ENST00000527739 POTEB3A0JP26 581 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 CHRNA1P02708 482 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 GHRP10912 638 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 SETQ01105 290 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-211ENST00000527739 FAM26DQ5JW98 314 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 MARCH8Q5T0T0 291 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 SWSAP1Q6NVH7 229 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 MIS18BP1Q6P0N0 1132 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 POTEBQ6S5H4 581 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 CKAP2LQ8IYA6 745 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 TRAPPC12Q8WVT3 735 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 IFIH1Q9BYX4 1025 aaKnown RBP21.88■■□□□ 1.09
CAPN1-211ENST00000527739 TBC1D22BQ9NU19 505 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 MTCH2Q9Y6C9 303 aa21.88■■□□□ 1.09
CAPN1-211ENST00000527739 TRANK1O15050 2925 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 IGLV3-22A0A075B6J6 115 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 GTPBP6O43824 516 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-211ENST00000527739 UPP2O95045 317 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 ATG7O95352 703 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 DEXIO95424 95 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 COL9A1P20849 921 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 PDXDC2PQ6P474 469 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 ABHD15Q6UXT9 468 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 TRMT1LQ7Z2T5 733 aaKnown RBP21.87■■□□□ 1.09
CAPN1-211ENST00000527739 CRYGNQ8WXF5 182 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 SLKQ9H2G2 1235 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-211ENST00000527739 ZNF302Q9NR11 478 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 MTUS1Q9ULD2 1270 aa21.87■■□□□ 1.09
CAPN1-211ENST00000527739 PTPRSQ13332 1948 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms