RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TRPC6Q9Y210 931 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 CNTNAP5Q8WYK1 1306 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 CDC45O75419 566 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 INSRRP14616 1297 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 GPM6BQ13491 265 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 TMEM192Q8IY95 271 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 FAM49AQ9H0Q0 323 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 MUC3AQ02505 3323 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 XIRP2A4UGR9 3374 aa25.56■■□□□ 1.68
TRAPPC4-208ENST00000527680 HMGB1P09429 215 aaKnown RBP25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 ARP10275 920 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 LPIN1Q14693 890 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 TSGA10IPQ3SY00 556 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 MARCH8Q5T0T0 291 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 TYW1BQ6NUM6 668 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 PPP1R18Q6NYC8 613 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 FIBCD1Q8N539 461 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 MRPL38Q96DV4 380 aaKnown RBP25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 ANO3Q9BYT9 981 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 GLT8D2Q9H1C3 349 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 UBE2ZQ9H832 354 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 CDY2AQ9Y6F7 541 aa25.55■■□□□ 1.68
TRAPPC4-208ENST00000527680 MBLAC1A4D2B0 266 aaPredicted RBP25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 STAT5BP51692 787 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 ACTR2P61160 394 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 CEP55Q53EZ4 464 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 IER5Q5VY09 327 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 ZBTB10Q96DT7 871 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 TMEM260Q9NX78 707 aa25.54■■□□□ 1.68
TRAPPC4-208ENST00000527680 H3BNC9 293 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 hCG_1984214I3L0E3 225 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 M0QZ92 97 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 STXBP3O00186 592 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 ENPP3O14638 875 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 MRPS6P82932 125 aaKnown RBP25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 MGAT3Q09327 533 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 FUT2Q10981 343 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 FBXO47Q5MNV8 452 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 TEX2Q8IWB9 1127 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 ZNF713Q8N859 430 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 PCYT2Q99447 389 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 BARHL2Q9NY43 387 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 NFASCO94856 1347 aa25.53■■□□□ 1.68
TRAPPC4-208ENST00000527680 RPLP2P05387 115 aaKnown RBP25.52■■□□□ 1.68
TRAPPC4-208ENST00000527680 KCNA5P22460 613 aa25.52■■□□□ 1.68
TRAPPC4-208ENST00000527680 EP400NLQ6ZTU2 488 aa25.52■■□□□ 1.68
TRAPPC4-208ENST00000527680 AGO4Q9HCK5 861 aaKnown RBP25.52■■□□□ 1.68
TRAPPC4-208ENST00000527680 BRWD1Q9NSI6 2320 aa25.52■■□□□ 1.68
TRAPPC4-208ENST00000527680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 CCDC196A0A1B0GTZ2 297 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 DDX39AO00148 427 aaKnown RBP25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 CDC27P30260 824 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 TMEM62Q0P6H9 643 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 AP3B2Q13367 1082 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 PLCB4Q15147 1175 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 JAKMIP3Q5VZ66 844 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 TSHZ1Q6ZSZ6 1077 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 PLPPR4Q7Z2D5 763 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 BANK1Q8NDB2 785 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 C1QTNF1Q9BXJ1 281 aa25.51■■□□□ 1.67
TRAPPC4-208ENST00000527680 POTEB3A0JP26 581 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 MEIS1O00470 390 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 BACH1O14867 736 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 CTNNB1P35222 781 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 ADD1P35611 737 aaKnown RBP25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 METAP2P50579 478 aaKnown RBP eCLIP25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 TIGD5Q53EQ6 642 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 POTEBQ6S5H4 581 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 TRAPPC12Q8WVT3 735 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 FAM217BQ9NTX9 383 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 PCDHA2Q9Y5H9 948 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 BDP1A6H8Y1 2624 aa25.5■■□□□ 1.67
TRAPPC4-208ENST00000527680 CPA1P15085 419 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 CD52P31358 61 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 SREBF1P36956 1147 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 APOBRQ0VD83 1088 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 ITGB3BPQ13352 177 aaPredicted RBP25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 Q6ZUG5 572 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 PLA2G4DQ86XP0 818 aa25.49■■□□□ 1.67
TRAPPC4-208ENST00000527680 RCAN1P53805 252 aa25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 BTG3Q14201 252 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 LEXMQ3ZCV2 418 aa25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 JAKMIP1Q96N16 626 aaKnown RBP25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 UIMC1Q96RL1 719 aa25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 AGO3Q9H9G7 860 aaKnown RBP25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 TRPV2Q9Y5S1 764 aa25.48■■□□□ 1.67
TRAPPC4-208ENST00000527680 NLRC5Q86WI3 1866 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 RB1P06400 928 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 SCG2P13521 617 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 BMPR1AP36894 532 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 CLK2P49760 499 aaKnown RBP25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 SLC26A2P50443 739 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 PFKFB3Q16875 520 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 FAM160B1Q5W0V3 765 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 BRF1Q92994 677 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 CELF4Q9BZC1 486 aaKnown RBP25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 EPHX3Q9H6B9 360 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 RWDD3Q9Y3V2 267 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 SQORQ9Y6N5 450 aa25.47■■□□□ 1.67
TRAPPC4-208ENST00000527680 ADGRA3Q8IWK6 1321 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms