RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CHGBP05060 677 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 UQCRHP07919 91 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 CSF2RBP32927 897 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 ZNF76P36508 570 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 INHBCP55103 352 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 EIF6P56537 245 aaKnown RBP4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 DGCR2P98153 550 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 Q6ZSN1 163 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 TSHZ1Q6ZSZ6 1077 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 TAX1BP1Q86VP1 789 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 ZSCAN30Q86W11 494 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 CREBRFQ8IUR6 639 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 DTX3Q8N9I9 347 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 GIMAP8Q8ND71 665 aaPredicted RBP4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 DIO2Q92813 273 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 LRRC37BQ96QE4 947 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 APBA2Q99767 749 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 SMC4Q9NTJ3 1288 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 GINM1Q9NU53 330 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 CALCOCO1Q9P1Z2 691 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 RBPJLQ9UBG7 517 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 PCDHGB7Q9Y5F8 929 aa4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 DHX57Q6P158 1386 aaKnown RBP4.5□□□□□ -1.69
CLNS1A-209ENST00000527299 LOC102724159A0A0B4J2E5 919 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 NOP56O00567 594 aaKnown RBP4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 MYO1BO43795 1136 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 KNG1P01042 644 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 SOX9P48436 509 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 KCNAB2Q13303 367 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 PWP2Q15269 919 aaKnown RBP4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 TESK1Q15569 626 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 SMAD2Q15796 467 aaKnown RBP4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 CCDC96Q2M329 555 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 CT47A1Q5JQC4 288 aaPredicted RBP4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 SASS6Q6UVJ0 657 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 FUKQ8N0W3 1084 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 TMTC2Q8N394 836 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 RCBTB1Q8NDN9 531 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 PHOSPHO1Q8TCT1 267 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 FAM210AQ96ND0 272 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 BCL2L13Q9BXK5 485 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 DLL4Q9NR61 685 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 MYOTQ9UBF9 498 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 SCRIBQ14160 1630 aa4.49□□□□□ -1.69
CLNS1A-209ENST00000527299 SMG6Q86US8 1419 aaKnown RBP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 CAPN2P17655 700 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 CALRP27797 417 aaKnown RBP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 ZNF143P52747 638 aaPredicted RBP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 CASP7P55210 303 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 RACK1P63244 317 aaKnown RBP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 FANCCQ00597 558 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 MTA1Q13330 715 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 PHF19Q5T6S3 580 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 VHLLQ6RSH7 139 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 ANKRD23Q86SG2 305 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 LDLRAD3Q86YD5 345 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 DNAJC10Q8IXB1 793 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 IFNL2Q8IZJ0 200 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 KREMEN2Q8NCW0 462 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 MNS1Q8NEH6 495 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 GIPC2Q8TF65 315 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 ITFG2Q969R8 447 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 CHMP4CQ96CF2 233 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 KATNBL1Q9H079 304 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 SMOC1Q9H4F8 434 aa4.48□□□□□ -1.69
CLNS1A-209ENST00000527299 SCAPERQ9BY12 1400 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 RAD17O75943 681 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 SCG5P05408 212 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 ACO1P21399 889 aaKnown RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 HOXC12P31275 282 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 MCM5P33992 734 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 CCDC173Q0VFZ6 552 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 LSAMPQ13449 338 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 ACBD5Q5T8D3 534 aaPredicted RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 ZNF771Q7L3S4 317 aaPredicted RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 GPR155Q7Z3F1 870 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 C1orf210Q8IVY1 113 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 REXO1L1PQ8IX06 675 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 TTLL11Q8NHH1 800 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 FEZ1Q99689 392 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 LGR4Q9BXB1 951 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 GRPEL1Q9HAV7 217 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 ASH2LQ9UBL3 628 aa4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 DDX41Q9UJV9 622 aaKnown RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 R3HCC1Q9Y3T6 440 aaKnown RBP4.47□□□□□ -1.69
CLNS1A-209ENST00000527299 IBTKQ9P2D0 1353 aaPredicted RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 U2SURPO15042 1029 aaKnown RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 MEFVO15553 781 aaPredicted RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 DGKIO75912 1065 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 C1SP09871 688 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 ZNF853P0CG23 659 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 NAT2P11245 290 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 MSNP26038 577 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms