RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 A0A0G2JLL6 359 aaPredicted RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 DHX15O43143 795 aaKnown RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 TBCAO75347 108 aaKnown RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 NR3C2P08235 984 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 ARMC9Q7Z3E5 817 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 PRRT2Q7Z6L0 340 aaPredicted RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 PNMA8AQ86V59 439 aaPredicted RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 VSIG10LQ86VR7 867 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 CHST13Q8NET6 341 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 ERO1AQ96HE7 468 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 CNOT6LQ96LI5 555 aaKnown RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 SAMM50Q9Y512 469 aa17.96■□□□□ 0.47
SNRNP35-204ENST00000527158 SPDYE5A6NIY4 337 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 LGALS16A8MUM7 142 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 MTIF2P46199 727 aaKnown RBP17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 ADKP55263 362 aaKnown RBP17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 ITGB3BPQ13352 177 aaPredicted RBP17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 RINT1Q6NUQ1 792 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 NLRX1Q86UT6 975 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 TC2NQ8N9U0 490 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 GLIS3Q8NEA6 775 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 EEF2KMTQ96G04 330 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 CLMNQ96JQ2 1002 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 LXNQ9BS40 222 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 OGFRQ9NZT2 677 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 TCEAL9Q9UHQ7 104 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.46
SNRNP35-204ENST00000527158 MAFGO15525 162 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 P4HBP07237 508 aaKnown RBP17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 GOLGA8FQ08AF8 430 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 GOLGA8DPQ0D2H9 430 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 LBX2Q6XYB7 198 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 BAG1Q99933 345 aaPredicted RBP17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 RUSC1Q9BVN2 902 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 KCND2Q9NZV8 630 aa17.95■□□□□ 0.46
SNRNP35-204ENST00000527158 DNM2P50570 870 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 IRX3P78415 501 aaPredicted RBP17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 RBL2Q08999 1139 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 TRIM14Q14142 442 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 GPRASP2Q96D09 838 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 ZSWIM4Q9H7M6 989 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 COL11A1P12107 1806 aaPredicted RBP17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 GAP43P17677 238 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 FKBP3Q00688 224 aaKnown RBP17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 PPIL2Q13356 520 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 CPLX3Q8WVH0 158 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 WDR90Q96KV7 1748 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 PANX2Q96RD6 677 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 FBXO40Q9UH90 709 aa17.94■□□□□ 0.46
SNRNP35-204ENST00000527158 A0A1W2PQC6 194 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 STX10O60499 249 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 STAM2O75886 525 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 C1orf186Q6ZWK4 172 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 CNGA4Q8IV77 575 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 SCFD1Q8WVM8 642 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 ZNF592Q92610 1267 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 WRAP73Q9P2S5 460 aaPredicted RBP17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 PAPPA2Q9BXP8 1791 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 ARHGEF35A5YM69 484 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 B4DLN1 442 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 ZBTB39O15060 712 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 ARHGAP6O43182 974 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 FAM13AO94988 1023 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 SFNP31947 248 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 JAK3P52333 1124 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 KRT76Q01546 638 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 DMTNQ08495 405 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 NELFCDQ8IXH7 590 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 FGFBP2Q9BYJ0 223 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 KCNH4Q9UQ05 1017 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
SNRNP35-204ENST00000527158 OTOFQ9HC10 1997 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 TRAF5O00463 557 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 QARSP47897 775 aaKnown RBP17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 ZCWPW2Q504Y3 356 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 RIOX2Q8IUF8 465 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 ZNF397Q8NF99 534 aaPredicted RBP17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 ZNF507Q8TCN5 953 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 CCDC51Q96ER9 411 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 INPP4AQ96PE3 977 aaPredicted RBP17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 MRPL44Q9H9J2 332 aaKnown RBP17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 AGTPBP1Q9UPW5 1226 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 PFASO15067 1338 aa17.92■□□□□ 0.46
SNRNP35-204ENST00000527158 WDR64B1ANS9 1081 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 ATP9AO75110 1047 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 SLU7O95391 586 aaKnown RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 GYPCP04921 128 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms