RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 PIK3CDO00329 1044 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 MMP10P09238 476 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 BMP3P12645 472 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 ASIC2Q16515 512 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 BMT2Q1RMZ1 405 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 AENQ8WTP8 325 aaKnown RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 CRACR2AQ9BSW2 395 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 SELENOOQ9BVL4 669 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 ARMCX3Q9UH62 379 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 BTNL10A8MVZ5 291 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 MSH4O15457 936 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 ECE2O60344 883 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 RPL13P26373 211 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 ACTN2P35609 894 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 NAP1L1P55209 391 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 RAPGEF1Q13905 1077 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 CFAP221Q4G0U5 840 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 GOLGA6L1Q8N7Z2 621 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 UIMC1Q96RL1 719 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 CWC15Q9P013 229 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 VAV3Q9UKW4 847 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
PTPMT1-204ENST00000527079 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 EYA4O95677 639 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 SYF2O95926 243 aaKnown RBP11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 ANXA13P27216 316 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 TNFRSF8P28908 595 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 PSMC6P62333 389 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.515e-17■■■□□ 18.6
PTPMT1-204ENST00000527079 ZSCAN26Q16670 478 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 USH1GQ495M9 461 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 STYK1Q6J9G0 422 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 SFR1Q86XK3 245 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 ANKRD13CQ8N6S4 541 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 LRRC1Q9BTT6 524 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 TYW1Q9NV66 732 aaKnown RBP11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 GRID2IPA4D2P6 1211 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 PLSCR1O15162 318 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 BUB1O43683 1085 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 RNF40O75150 1001 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 RPS6KA5O75582 802 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 ZMYND10O75800 440 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 GDF11O95390 407 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 XRCC5P13010 732 aaKnown RBP11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 GAP43P17677 238 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 CASP5P51878 434 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 STIM2Q9P246 746 aa11.86□□□□□ -0.51
PTPMT1-204ENST00000527079 ATP8B3O60423 1300 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 MEIS1O00470 390 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 PRPF6O94906 941 aaKnown RBP11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 MYBL2P10244 700 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 CAPN2P17655 700 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 HOXD13P35453 343 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 ZNF76P36508 570 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 EPHB4P54760 987 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 EIF2AK1Q9BQI3 630 aaKnown RBP11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM204AQ9H8W3 233 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 A0A087X0T9 212 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 H0YIN7 160 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 OPLAHO14841 1288 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 NCK2O43639 380 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 PALMO75781 387 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 GH2P01242 217 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM228BP0C875 321 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 UCHL3P15374 230 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 CXCR5P32302 372 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 SNAP25P60880 206 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 SLC15A2Q16348 729 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 KIAA0753Q2KHM9 967 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 MEI1Q5TIA1 1274 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
PTPMT1-204ENST00000527079 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms