RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
CCDC90B-208ENST00000527025 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 WNT7AO00755 349 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TLR3O15455 904 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TREHO43280 583 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 ATG7O95352 703 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TDP2O95551 362 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 ACTR2P61160 394 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 ADAM17P78536 824 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 FPGSQ05932 587 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TMEM240Q5SV17 173 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 FAM109BQ6ICB4 259 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 CCDC83Q8IWF9 413 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 C7orf31Q8N865 590 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 CCDC148Q8NFR7 591 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TBCKQ8TEA7 893 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 CCDC12Q8WUD4 166 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 SEZ6LQ9BYH1 1024 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 JPH1Q9HDC5 661 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 CXXC1Q9P0U4 656 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-208ENST00000527025 NFASCO94856 1347 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 TANC1Q9C0D5 1861 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 NOP56O00567 594 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 MSH4O15457 936 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 LGR5O75473 907 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 IQCF3P0C7M6 154 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 ATP4AP20648 1035 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 ZNF76P36508 570 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 FOSBP53539 338 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 NR5A1Q13285 461 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 INF2Q27J81 1249 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 LRIT3Q3SXY7 679 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 PRR16Q569H4 304 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 MARCH8Q5T0T0 291 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 RASIP1Q5U651 963 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 ABHD15Q6UXT9 468 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 ZNF365Q70YC5 407 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 GIMAP8Q8ND71 665 aaPredicted RBP10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 IL27Q8NEV9 243 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 BICD2Q8TD16 824 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 SEPT1Q8WYJ6 367 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 CDHR1Q96JP9 859 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 MBOAT7Q96N66 472 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 MFRPQ9BY79 579 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
CCDC90B-208ENST00000527025 CYP3A7-CYP3A51PA0A087WV96 503 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 GRXCR1A8MXD5 290 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 SLC37A4O43826 429 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 CDKL5O76039 1030 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 CYP3A7P24462 503 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 MARK3P27448 753 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 USP11P51784 963 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 SERINC5Q86VE9 423 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 TMEM199Q8N511 208 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 ZNF577Q9BSK1 485 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 KATNAL1Q9BW62 490 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 IL23AQ9NPF7 189 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 PTPRSQ13332 1948 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 COL6A3P12111 3177 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 SIP14410 1827 aa10.07□□□□□ -0.8
CCDC90B-208ENST00000527025 GBF1Q92538 1859 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 EYSQ5T1H1 3165 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 NBNO60934 754 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 CKBP12277 381 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 RBL2Q08999 1139 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 PTK7Q13308 1070 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 Q4G0T1 1027 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 KRT40Q6A162 431 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 MCTP2Q6DN12 878 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 GALNT17Q6IS24 598 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 B3GNT9Q6UX72 402 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 RUFY4Q6ZNE9 571 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 PIK3AP1Q6ZUJ8 805 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 Q7L0L9 218 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 OTOP2Q7RTS6 562 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 DEFB128Q7Z7B8 93 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 CCDC60Q8IWA6 550 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 TRAPPC12Q8WVT3 735 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 SDF4Q9BRK5 362 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
CCDC90B-208ENST00000527025 EMSYQ7Z589 1322 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms