RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 DUX4L2P0CJ85 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4L3P0CJ86 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4L4P0CJ87 422 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4L5P0CJ88 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4L6P0CJ89 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4L7P0CJ90 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 GCFC2P16383 781 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 ZNF18P17022 549 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 CUL1Q13616 776 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 ALCAMQ13740 583 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 NOP53Q9NZM5 478 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DUX4Q9UBX2 424 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 RECQLP46063 649 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 NDUFA8P51970 172 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 MRPL28Q13084 256 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 PARD3Q8TEW0 1356 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 USP19O94966 1318 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 COPEO14579 308 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 SLCO1A2P46721 670 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 GPATCH4Q5T3I0 446 aaKnown RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 TAGAPQ8N103 731 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 ELMOD1Q8N336 334 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 IFT43Q96FT9 208 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 OTUB1Q96FW1 271 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-213ENST00000526357 CYTH2Q99418 400 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 MOSPD1Q9UJG1 213 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 KCNA1Q09470 495 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 SPARCL1Q14515 664 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 CCDC17Q96LX7 622 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 CLIC6Q96NY7 704 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 HINFPQ9BQA5 517 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 EDEM3Q9BZQ6 932 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
CTNND1-213ENST00000526357 A0A1W2PQ27 194 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 A0A1W2PQ64 194 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 A0A1W2PQD8 194 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GFPT2O94808 682 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 MYO1DO94832 1006 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 TJP3O95049 919 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 A1BGP04217 495 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 PSMD2Q13200 908 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 THEM5Q8N1Q8 247 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 FOXP1Q9H334 677 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 RPF1Q9H9Y2 349 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GCNT4Q9P109 453 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 ARHGAP26Q9UNA1 814 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 LMTK3Q96Q04 1460 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 SEC31AO94979 1220 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CCDC159P0C7I6 412 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 NR1D1P20393 614 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CA4P22748 312 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 TRIP13Q15645 432 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 DSTYKQ6XUX3 929 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 MAGEB5Q9BZ81 275 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 THAP9Q9H5L6 903 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CLIC4Q9Y696 253 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 ADCY9O60503 1353 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 PSAPP07602 524 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CARSP49589 748 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 TMPRSS15P98073 1019 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GPR162Q16538 588 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 FASTKD5Q7L8L6 764 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 TEX9Q8N6V9 391 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 FAM133AQ8N9E0 248 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 HSPH1Q92598 858 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CEP170P1Q96L14 293 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 FMO2Q99518 471 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 DNAJC17Q9NVM6 304 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 NDUFB9Q9Y6M9 179 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GYG2O15488 501 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 CTIFO43310 598 aaKnown RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 MECOMQ03112 1051 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 PCIF1Q9H4Z3 704 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 HPCAL4Q9UM19 191 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 ARL4CP56559 192 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 NR1H3Q13133 447 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 ABHD8Q96I13 439 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-213ENST00000526357 STRIP2Q9ULQ0 834 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 PCDHA13Q9Y5I0 950 aa10.11□□□□□ -0.79
CTNND1-213ENST00000526357 GRIN2AQ12879 1464 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 EIF3DO15371 548 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNND1-213ENST00000526357 APOA1P02647 267 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 RWDD2BP57060 319 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 COPS2P61201 443 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 GOLGA8FQ08AF8 430 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 GOLGA8DPQ0D2H9 430 aa10.1□□□□□ -0.79
CTNND1-213ENST00000526357 MXD4Q14582 209 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-213ENST00000526357 EFTUD2Q15029 972 aaKnown RBP eCLIP10.1□□□□□ -0.793e-8■■■■■ 29.5
CTNND1-213ENST00000526357 ZC3H18Q86VM9 953 aaKnown RBP10.1□□□□□ -0.79
CTNND1-213ENST00000526357 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms