RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 GJA9P57773 515 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ACTR2P61160 394 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 PSMC6P62333 389 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 MDM2Q00987 491 aaPredicted RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 TTLL4Q14679 1199 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ARHGEF6Q15052 776 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 PWP2Q15269 919 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 PKN2Q16513 984 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 CALCRLQ16602 461 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 AXDND1Q5T1B0 1012 aaPredicted RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 UTP14CQ5TAP6 766 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ABHD15Q6UXT9 468 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 KCNK18Q7Z418 384 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 METTL3Q86U44 580 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 NLRX1Q86UT6 975 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 TEX2Q8IWB9 1127 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 DHX37Q8IY37 1157 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 LEO1Q8WVC0 666 aaPredicted RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 NLRP7Q8WX94 980 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 KAT2BQ92831 832 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 SPATA33Q96N06 139 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 ZSCAN16Q9H4T2 348 aaPredicted RBP7.33□□□□□ -1.24
CD44-214ENST00000525211 EHMT1Q9H9B1 1298 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 XPNPEP3Q9NQH7 507 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 RGL1Q9NZL6 768 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 FRMPD3Q5JV73 1810 aa7.33□□□□□ -1.24
CD44-214ENST00000525211 NFASCO94856 1347 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 GADD45BO75293 160 aaPredicted RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 DUSP11O75319 330 aaKnown RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 MED24O75448 989 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 STAM2O75886 525 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 ATG7O95352 703 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 GH1P01241 217 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 OATP04181 439 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 GCFC2P16383 781 aaKnown RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 CLCN1P35523 988 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 SOX10P56693 466 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 NKX3-2P78367 333 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 ZNF200P98182 395 aaPredicted RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 SLC39A14Q15043 492 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 KCNA10Q16322 511 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 RILPL1Q5EBL4 403 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 NCAPH2Q6IBW4 605 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 SHC4Q6S5L8 630 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 METTL7BQ6UX53 244 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 CCDC60Q8IWA6 550 aaPredicted RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 U2AF1L4Q8WU68 220 aaKnown RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 FERMT2Q96AC1 680 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 ABHD8Q96I13 439 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 DYDC2Q96IM9 177 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 EPSTI1Q96J88 318 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 PLIN2Q99541 437 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 SENP7Q9BQF6 1050 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 SH2D3AQ9BRG2 576 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 C16orf70Q9BSU1 422 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 CSRNP2Q9H175 543 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 TTC12Q9H892 705 aaPredicted RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 SLC9A2Q9UBY0 812 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 NRBP1Q9UHY1 535 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 RCOR1Q9UKL0 485 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
CD44-214ENST00000525211 NOL7Q9UMY1 257 aaKnown RBP7.32□□□□□ -1.24
CD44-214ENST00000525211 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 VWA3AA6NCI4 1184 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 A6NJR5 290 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 GAS7O60861 476 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 LGR5O75473 907 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 SGPL1O95470 568 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 ASGR1P07306 291 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 GJB1P08034 283 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 MYL3P08590 195 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 SUPT20HL2P0C7V6 817 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 TGFB3P10600 412 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 RARBP10826 455 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 MARK3P27448 753 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 TCF7P36402 384 aaPredicted RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 GJA8P48165 433 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 NUCB2P80303 420 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 SETQ01105 290 aaPredicted RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 CYP4A11Q02928 519 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 GRB10Q13322 594 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 PPP2R5CQ13362 524 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 CTTNQ14247 550 aaKnown RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 GNPTABQ3T906 1256 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 SWSAP1Q6NVH7 229 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 TRMT1LQ7Z2T5 733 aaKnown RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 UBE2Q1Q7Z7E8 422 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 IGSF22Q8N9C0 903 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms