RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 LRBAP50851 2863 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 PCDH11YQ9BZA8 1340 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-209ENST00000525132 FAM221AA4D161 298 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 PRR19A6NJB7 356 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 GFRA2O00451 464 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 PSMD14O00487 310 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 DHX15O43143 795 aaKnown RBP4.33□□□□□ -1.72
CSDE1-209ENST00000525132 BMP3P12645 472 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 FSTP19883 344 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 MAP4P27816 1152 aaKnown RBP4.33□□□□□ -1.72
CSDE1-209ENST00000525132 ID3Q02535 119 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 TRIM60Q495X7 471 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 RNF43Q68DV7 783 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 CYFIP1Q7L576 1253 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 CNBD1Q8NA66 436 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 RSRP1Q9BUV0 290 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 C1GALT1Q9NS00 363 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 PCDHB5Q9Y5E4 795 aa4.33□□□□□ -1.72
CSDE1-209ENST00000525132 HMX2A2RU54 273 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 STXBP3O00186 592 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 TCERG1O14776 1098 aaKnown RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 DYNC1LI2O43237 492 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 SLC5A1P13866 664 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 RAG1P15918 1043 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 ALDH1B1P30837 517 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 ST5P78524 1137 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 FANCCQ00597 558 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 CFHR1Q03591 330 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 TROAPQ12815 778 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 INPP5AQ14642 412 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 CRYBG3Q68DQ2 2970 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 LRFN4Q6PJG9 635 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 SLC39A5Q6ZMH5 540 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 BEND4Q6ZU67 534 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 UBE3DQ7Z6J8 389 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 TRIM42Q8IWZ5 723 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 SHISA5Q8N114 240 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 C12orf50Q8NA57 414 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 SREK1Q8WXA9 508 aaKnown RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 MAP4K1Q92918 833 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 SCNM1Q9BWG6 230 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 ZC3H12CQ9C0D7 883 aaKnown RBP4.32□□□□□ -1.72
CSDE1-209ENST00000525132 ITPR2Q14571 2701 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 F8P00451 2351 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 CSMD1Q96PZ7 3565 aa4.32□□□□□ -1.72
CSDE1-209ENST00000525132 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 TONSLQ96HA7 1378 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 RPGRIP1LQ68CZ1 1315 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 PI15O43692 258 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 CAPNS1P04632 268 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 TNFRSF8P28908 595 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 ADMP35318 185 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 CDK8P49336 464 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 NFIAQ12857 509 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 LRRC14Q15048 493 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 SMAD2Q15796 467 aaKnown RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 ZBTB37Q5TC79 503 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 EP400NLQ6ZTU2 488 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 CCDC84Q86UT8 332 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 ZC3H18Q86VM9 953 aaKnown RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 METTL16Q86W50 562 aaKnown RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 RNF214Q8ND24 703 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 OPTNQ96CV9 577 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 LRRC3Q9BY71 257 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 BACH2Q9BYV9 841 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 VTI1BQ9UEU0 232 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 TLR6Q9Y2C9 796 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 SAMM50Q9Y512 469 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 HCFC2Q9Y5Z7 792 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 TACC3Q9Y6A5 838 aa4.31□□□□□ -1.72
CSDE1-209ENST00000525132 UTP20O75691 2785 aaKnown RBP4.31□□□□□ -1.72
CSDE1-209ENST00000525132 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 ANKRD50Q9ULJ7 1429 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 OTOGQ6ZRI0 2925 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 MTORP42345 2549 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 PCDH11XQ9BZA7 1347 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 BTBD19C9JJ37 291 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 PPM1GO15355 546 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-209ENST00000525132 GREM1O60565 184 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 CILPO75339 1184 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 HMGCRP04035 888 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 ACRP10323 421 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 RLBP1P12271 317 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 CANXP27824 592 aaKnown RBP4.3□□□□□ -1.72
CSDE1-209ENST00000525132 CAP2P40123 477 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 TTLL4Q14679 1199 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 ARTNQ5T4W7 220 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 ZNF365Q70YC5 407 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 FBLIM1Q8WUP2 373 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 RIN2Q8WYP3 895 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-209ENST00000525132 KCNB2Q92953 911 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 ISL2Q96A47 359 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 TMEM74Q96NL1 305 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 DBNDD2Q9BQY9 259 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms