RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SPATA31C1P0DKV0 1188 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 TMEM119Q4V9L6 283 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 HYIQ5T013 277 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 MAP3K21Q5TCX8 1036 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 POTEGQ6S5H5 508 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 TPH2Q8IWU9 490 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 PPTC7Q8NI37 304 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 AP5M1Q9H0R1 490 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 DDX19AQ9NUU7 478 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 GABBR1Q9UBS5 961 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 KIAA1024Q9UPX6 916 aa17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-213ENST00000524895 GSTTP1A0A1W2PQM5 241 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 DYNC1LI2O43237 492 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 DKC1O60832 514 aaKnown RBP eCLIP17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 SLITRK3O94933 977 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 ATG7O95352 703 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 MUTP22033 750 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 CCND3P30281 292 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 PSMC5P62195 406 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 E2F4Q16254 413 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 ECM1Q16610 540 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 CCDC60Q8IWA6 550 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 ZSWIM4Q9H7M6 989 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 ZNF302Q9NR11 478 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 Q9Y3F1 56 aa17.73■□□□□ 0.43
TSPAN4-213ENST00000524895 IGSF9BQ9UPX0 1349 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 DUSP11O75319 330 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 RARBP10826 455 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 UGCGQ16739 394 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 LONRF3Q496Y0 759 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 KRBA2Q6ZNG9 492 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 KCTD17Q8N5Z5 321 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 SH3TC2Q8TF17 1288 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 SYAP1Q96A49 352 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 TIGD1Q96MW7 591 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 CUEDC2Q9H467 287 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 SERTAD1Q9UHV2 236 aa17.72■□□□□ 0.43
TSPAN4-213ENST00000524895 IGKV6D-21A0A0A0MT36 114 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 MMP3P08254 477 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 SLFN14P0C7P3 912 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 CPT1AP50416 773 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 NAALADL2Q58DX5 795 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 BRDTQ58F21 947 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 RAD54LQ92698 747 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 NACC1Q96RE7 527 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 HMX1Q9NP08 348 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 DNM3Q9UQ16 869 aa17.71■□□□□ 0.43
TSPAN4-213ENST00000524895 EMSYQ7Z589 1322 aa17.71■□□□□ 0.42
TSPAN4-213ENST00000524895 E9PMD0 336 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 LYPLA2O95372 231 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 STAT5BP51692 787 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 PRKCEQ02156 737 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 DGKDQ16760 1214 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 KANK3Q6NY19 840 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 KCNK18Q7Z418 384 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 LARP4BQ92615 738 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 GLG1Q92896 1179 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 CCDC43Q96MW1 224 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 CLSTN2Q9H4D0 955 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 HOOK1Q9UJC3 728 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 SYNRGQ9UMZ2 1314 aa17.7■□□□□ 0.42
TSPAN4-213ENST00000524895 A6NJR5 290 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 MSCO60682 206 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 LGR5O75473 907 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 LGALS2P05162 132 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 CCDC183Q5T5S1 534 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 FBXO46Q6PJ61 603 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 TRIM50Q86XT4 487 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 C4orf19Q8IY42 314 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms