RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 LCORQ96JN0 433 aaPredicted RBP6.57□□□□□ -1.36
SREK1-213ENST00000523655 YTHDC1Q96MU7 727 aaKnown RBP6.57□□□□□ -1.36
SREK1-213ENST00000523655 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
SREK1-213ENST00000523655 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
SREK1-213ENST00000523655 NGRNQ9NPE2 291 aaKnown RBP6.57□□□□□ -1.36
SREK1-213ENST00000523655 CCDC88BA6NC98 1476 aa6.57□□□□□ -1.36
SREK1-213ENST00000523655 KIAA0586Q9BVV6 1533 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 ACOT7O00154 380 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 COL6A1P12109 1028 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 KIAA2012Q0VF49 1180 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 KIZQ2M2Z5 673 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 SPATS1Q496A3 300 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
SREK1-213ENST00000523655 LRRC47Q8N1G4 583 aaKnown RBP6.56□□□□□ -1.36
SREK1-213ENST00000523655 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 PHOSPHO1Q8TCT1 267 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 SH3RF2Q8TEC5 729 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 BCORL1Q5H9F3 1711 aa6.56□□□□□ -1.36
SREK1-213ENST00000523655 SRCAPQ6ZRS2 3230 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 ABCC2Q92887 1545 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 RIMS1Q86UR5 1692 aaKnown RBP6.55□□□□□ -1.36
SREK1-213ENST00000523655 ZNF536O15090 1300 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 STRCQ7RTU9 1775 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 FAM221BA6H8Z2 402 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 PLATP00750 562 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
SREK1-213ENST00000523655 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
SREK1-213ENST00000523655 LGI4Q8N135 537 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 UHMK1Q8TAS1 419 aaKnown RBP6.55□□□□□ -1.36
SREK1-213ENST00000523655 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 SSBP3Q9BWW4 388 aaPredicted RBP6.55□□□□□ -1.36
SREK1-213ENST00000523655 TMEM168Q9H0V1 697 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 ST6GALNAC2Q9UJ37 374 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 DSEQ9UL01 958 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 ZDHHC9Q9Y397 364 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 FHAD1B1AJZ9 1412 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 PTPRGP23470 1445 aa6.55□□□□□ -1.36
SREK1-213ENST00000523655 KCNK3O14649 394 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 FAHP16930 419 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 RBM10P98175 930 aaKnown RBP6.54□□□□□ -1.36
SREK1-213ENST00000523655 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 IGDCC4Q8TDY8 1250 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 EXOC2Q96KP1 924 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 CDC6Q99741 560 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 PPP4R1LQ9P1A2 415 aa6.54□□□□□ -1.36
SREK1-213ENST00000523655 TRBV23-1A0A0A0MS06 115 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.53□□□□□ -1.36
SREK1-213ENST00000523655 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
SREK1-213ENST00000523655 MAFKO60675 156 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
SREK1-213ENST00000523655 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
SREK1-213ENST00000523655 ADAM17P78536 824 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 PFKPQ01813 784 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 SPIRE1Q08AE8 756 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 CD276Q5ZPR3 534 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 VASNQ6EMK4 673 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.53□□□□□ -1.36
SREK1-213ENST00000523655 TRIM48Q8IWZ4 208 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.53□□□□□ -1.36
SREK1-213ENST00000523655 GPATCH3Q96I76 525 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 SLC39A2Q9NP94 309 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 SMPD4Q9NXE4 827 aa6.53□□□□□ -1.36
SREK1-213ENST00000523655 ADAMTS12P58397 1594 aa6.52□□□□□ -1.36
SREK1-213ENST00000523655 CD109Q6YHK3 1445 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 FAM47E-STBD1D6RA91 191 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 B4GALT4O60513 344 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 RAPGEF3O95398 923 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 IL18BPO95998 194 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
SREK1-213ENST00000523655 BMS1Q14692 1282 aaKnown RBP6.52□□□□□ -1.37
SREK1-213ENST00000523655 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 BORAQ6PGQ7 559 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 FAM124AQ86V42 546 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 OSTM1Q86WC4 334 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 KBTBD2Q8IY47 623 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 ZBTB38Q8NAP3 1195 aaPredicted RBP6.52□□□□□ -1.37
SREK1-213ENST00000523655 TTLL11Q8NHH1 800 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 ZFP69BQ9UJL9 534 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 PCDHA9Q9Y5H5 950 aa6.52□□□□□ -1.37
SREK1-213ENST00000523655 ABCA5Q8WWZ7 1642 aa6.51□□□□□ -1.37
SREK1-213ENST00000523655 FAM90A27PA6NNH2 459 aa6.51□□□□□ -1.37
SREK1-213ENST00000523655 TOM1O60784 492 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms