RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 JPH1Q9HDC5 661 aaPredicted RBP16.11■□□□□ 0.17
HMBOX1-209ENST00000522468 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
HMBOX1-209ENST00000522468 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
HMBOX1-209ENST00000522468 KIAA1671Q9BY89 1806 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 H3BNC9 293 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 STXBP3O00186 592 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 UPP2O95045 317 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 GHRP10912 638 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 COL9A1P20849 921 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 MARK3P27448 753 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 CLK2P49760 499 aaKnown RBP16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 COL19A1Q14993 1142 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 GLG1Q92896 1179 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 YME1L1Q96TA2 773 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 UBE2ZQ9H832 354 aaPredicted RBP16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 SLC9A2Q9UBY0 812 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 NFASCO94856 1347 aa16.1■□□□□ 0.17
HMBOX1-209ENST00000522468 MEIS1O00470 390 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 ZBTB43O43298 467 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 ATG7O95352 703 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 ARP10275 920 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 INSRRP14616 1297 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 CDC27P30260 824 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 RCAN1P53805 252 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 NAPAP54920 295 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 RTN1Q16799 776 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 TMEM192Q8IY95 271 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 ZBTB10Q96DT7 871 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 V9GY48 417 aaPredicted RBP16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
HMBOX1-209ENST00000522468 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 ENPP3O14638 875 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 FOSP01100 380 aaPredicted RBP16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 SREBF1P36956 1147 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 ACTR2P61160 394 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 MRPS6P82932 125 aaKnown RBP16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 PLCB4Q15147 1175 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 PLPPR4Q7Z2D5 763 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.163e-7■■□□□ 14.2
HMBOX1-209ENST00000522468 KCNB2Q92953 911 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 ZNF689Q96CS4 500 aaPredicted RBP16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 ANO3Q9BYT9 981 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 CD320Q9NPF0 282 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
HMBOX1-209ENST00000522468 RRN3P2A6NIE6 340 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 C5orf67F2Z3F1 127 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 CCNE2O96020 404 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 ADCY7P51828 1080 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 GPM6BQ13491 265 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 TSHZ1Q6ZSZ6 1077 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 NEK9Q8TD19 979 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 RAPGEFL1Q9UHV5 662 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 SQORQ9Y6N5 450 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 NID2Q14112 1375 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 EVPLQ92817 2033 aa16.07■□□□□ 0.16
HMBOX1-209ENST00000522468 MYH9P35579 1960 aaKnown RBP16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 IGLV3-22A0A075B6J6 115 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 KLF18A0A0U1RQI7 1052 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 ADAMTS3O15072 1205 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 DHX15O43143 795 aaKnown RBP16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 CDC45O75419 566 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 IGBP1P78318 339 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 KRT32Q14532 448 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 PTPROQ16827 1216 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 TIGD5Q53EQ6 642 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 RTN4RL1Q86UN2 441 aaPredicted RBP16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 TRAPPC12Q8WVT3 735 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 EPHX3Q9H6B9 360 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
HMBOX1-209ENST00000522468 IGSF9BQ9UPX0 1349 aa16.05■□□□□ 0.16
HMBOX1-209ENST00000522468 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms