RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CROTQ9UKG9 612 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 ASXL2Q76L83 1435 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 VPS8Q8N3P4 1428 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 K7ESM1 405 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 WNT9AO14904 365 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 PRICKLE3O43900 615 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 EFCAB14O75071 495 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 FBXO21O94952 628 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 ENO2P09104 434 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 COL6A2P12110 1019 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 ZNF28P17035 718 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 BUD31P41223 144 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 EPHA5P54756 1037 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 ST5P78524 1137 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 GUCY1A3Q02108 690 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 GRIN1Q05586 938 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 SERINC3Q13530 473 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 SKOR2Q2VWA4 1001 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 SPATS1Q496A3 300 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 FAM47CQ5HY64 1035 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 FAM209AQ5JX71 171 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 KCTD1Q719H9 257 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 FERMT3Q86UX7 667 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 CLEC4DQ8WXI8 215 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 FBXW5Q969U6 566 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 BARX1Q9HBU1 254 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-209ENST00000521559 TRAF6Q9Y4K3 522 aa4.74□□□□□ -1.65
VPS13B-209ENST00000521559 EPRSP07814 1512 aaKnown RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 ADCY10Q96PN6 1610 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 NKRFO15226 690 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 DIAPH1O60610 1272 aaKnown RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 PLATP00750 562 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 FAM153BP0C7A2 387 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 RASA3Q14644 834 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 GPR19Q15760 415 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 CRY1Q16526 586 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 TRMT10BQ6PF06 316 aaKnown RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 TMC5Q6UXY8 1006 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 C16orf59Q7L2K0 433 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 PRRT2Q7Z6L0 340 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 DTX3Q8N9I9 347 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 ZSWIM2Q8NEG5 633 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 ZSWIM3Q96MP5 696 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 YTHDC1Q96MU7 727 aaKnown RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 CATSPERZQ9NTU4 200 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 SNTG2Q9NY99 539 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 MRPS23Q9Y3D9 190 aaKnown RBP4.73□□□□□ -1.65
VPS13B-209ENST00000521559 FYCO1Q9BQS8 1478 aa4.73□□□□□ -1.65
VPS13B-209ENST00000521559 RAPGEF6Q8TEU7 1601 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 CKMP06732 381 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ADRB1P08588 477 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 GJA4P35212 333 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 SMAD2Q15796 467 aaKnown RBP4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ZNF827Q17R98 1081 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 DBX2Q6ZNG2 339 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ZC3H7AQ8IWR0 971 aaKnown RBP4.72□□□□□ -1.65
VPS13B-209ENST00000521559 KLHL36Q8N4N3 616 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ARHGAP20Q9P2F6 1191 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 INVSQ9Y283 1065 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 PCDHA8Q9Y5H6 950 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 DUSP10Q9Y6W6 482 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ABCC10Q5T3U5 1492 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 WDR7Q9Y4E6 1490 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 MAPKBP1O60336 1514 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 TROQ12816 1431 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-209ENST00000521559 ZNF536O15090 1300 aa4.72□□□□□ -1.65
VPS13B-209ENST00000521559 CCDC18Q5T9S5 1454 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 ARVCFO00192 962 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 ITGB3P05106 788 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 C6orf222P0C671 652 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 MLLT6P55198 1093 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 EFEMP1Q12805 493 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 NFE2L2Q16236 605 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 FOXB2Q5VYV0 432 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 BTBD8Q5XKL5 378 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 GLB1LQ6UWU2 654 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 DPP8Q6V1X1 898 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 PROSER1Q86XN7 944 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 RBM12BQ8IXT5 1001 aaKnown RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 PMFBP1Q8TBY8 1022 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 IGDCC4Q8TDY8 1250 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 THAP3Q8WTV1 239 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 EXOC2Q96KP1 924 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 ATP23Q9Y6H3 246 aa4.71□□□□□ -1.66
VPS13B-209ENST00000521559 CDK13Q14004 1512 aaKnown RBP4.71□□□□□ -1.66
VPS13B-209ENST00000521559 MTUS2Q5JR59 1369 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 FAM221BA6H8Z2 402 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 LAMTOR5O43504 91 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 LTFP02788 710 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 PFKPQ01813 784 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 NFATC3Q12968 1075 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 SKIDA1Q1XH10 827 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 FIGNQ5HY92 759 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 CD276Q5ZPR3 534 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 SREK1Q8WXA9 508 aaKnown RBP4.7□□□□□ -1.66
VPS13B-209ENST00000521559 ZCCHC14Q8WYQ9 949 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms