RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RAP1GAPP47736 663 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
SKP1-208ENST00000521216 DHCR24Q15392 516 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 ZNF124Q15973 351 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 CD276Q5ZPR3 534 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 CNKSR3Q6P9H4 555 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 FKBP9P1Q75LS8 142 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 C11orf74Q86VG3 221 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 POU5F2Q8N7G0 328 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 SMC1BQ8NDV3 1235 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 HIPK4Q8NE63 616 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 ATL2Q8NHH9 583 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 DLG3Q92796 817 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 ZBTB8AQ96BR9 441 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 PWWP2AQ96N64 755 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 TTC1Q99614 292 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 GORASP1Q9BQQ3 440 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 FAM126AQ9BYI3 521 aaPredicted RBP7.2□□□□□ -1.26
SKP1-208ENST00000521216 SLC39A2Q9NP94 309 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 TOMM22Q9NS69 142 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 KCTD3Q9Y597 815 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 COL4A3BPQ9Y5P4 624 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 PMF1-BGLAPU3KQ54 211 aa7.2□□□□□ -1.26
SKP1-208ENST00000521216 KRT1P04264 644 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 ENO2P09104 434 aaPredicted RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 CPEP16870 476 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 IBSPP21815 317 aaPredicted RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 ADCYAP1R1P41586 468 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 ID4P47928 161 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 OCRLQ01968 901 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 PTPROQ16827 1216 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 PHF19Q5T6S3 580 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 LIPIQ6XZB0 460 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 PASD1Q8IV76 773 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 TMEFF1Q8IYR6 380 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 ELF4Q99607 663 aaPredicted RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 PDGFDQ9GZP0 370 aaPredicted RBP7.19□□□□□ -1.26
SKP1-208ENST00000521216 IFT22Q9H7X7 185 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 ACSS2Q9NR19 701 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 SPTLC3Q9NUV7 552 aa7.19□□□□□ -1.26
SKP1-208ENST00000521216 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 NEMP1O14524 444 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.261e-12■■□□□ 13.5
SKP1-208ENST00000521216 PTX3P26022 381 aaPredicted RBP7.18□□□□□ -1.26
SKP1-208ENST00000521216 TXKP42681 527 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 GLRBP48167 497 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 PFKPQ01813 784 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 CC2D1AQ6P1N0 951 aaPredicted RBP7.18□□□□□ -1.26
SKP1-208ENST00000521216 FAM129CQ86XR2 697 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
SKP1-208ENST00000521216 GBP4Q96PP9 640 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 C11orf84Q9BUA3 381 aaPredicted RBP7.18□□□□□ -1.26
SKP1-208ENST00000521216 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 WASF3Q9UPY6 502 aa7.18□□□□□ -1.26
SKP1-208ENST00000521216 PRAMEF22A3QJZ6 481 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 RFXAPO00287 272 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 TSPAN15O95858 294 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
SKP1-208ENST00000521216 ITGA1P56199 1179 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 KCNA10Q16322 511 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 SKIDA1Q1XH10 827 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 ATP13A4Q4VNC1 1196 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 ZNF385BQ569K4 471 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 CATSPEREQ5SY80 951 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 PRAMEF18Q5VWM3 479 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 CREB3L3Q68CJ9 461 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 PROSER1Q86XN7 944 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 ASB15Q8WXK1 588 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 CLIC6Q96NY7 704 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 UCKL1Q9NWZ5 548 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 CROTQ9UKG9 612 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 SPO11Q9Y5K1 396 aa7.17□□□□□ -1.26
SKP1-208ENST00000521216 CYP17A1P05093 508 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 MC4RP32245 332 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 LSSP48449 732 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 LINC00310P59036 64 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 HERVK_113P62684 666 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 AMPD3Q01432 767 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 EFHBQ8N7U6 833 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 KYQ8NBH2 561 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 BHLHE22Q8NFJ8 381 aaPredicted RBP7.16□□□□□ -1.26
SKP1-208ENST00000521216 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
SKP1-208ENST00000521216 EMC7Q9NPA0 242 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 CD320Q9NPF0 282 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 PCDH12Q9NPG4 1184 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 HSPBP1Q9NZL4 362 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 ARHGAP20Q9P2F6 1191 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 MCM8Q9UJA3 840 aa7.16□□□□□ -1.26
SKP1-208ENST00000521216 ZNF839A8K0R7 811 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 NUAK1O60285 661 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 ZEB2O60315 1214 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms