RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 DIRC2Q96SL1 478 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 FOXQ1Q9C009 403 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 BCL11AQ9H165 835 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 GPN3Q9UHW5 284 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-208ENST00000521037 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 CSADQ9Y600 493 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 CHD6Q8TD26 2715 aa5.05□□□□□ -1.6
VPS13B-208ENST00000521037 DCDC2CA8MYV0 355 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 H3BRB1 525 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 PDHXO00330 501 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 KRT37O76014 449 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 CYP2C8P10632 490 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 HOXA5P20719 270 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 CDK11BP21127 795 aaKnown RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 MMP14P50281 582 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 KCNQ1P51787 676 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 TFF2Q03403 129 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 SLBPQ14493 270 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 AKNAD1Q5T1N1 836 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 KIF6Q6ZMV9 814 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 ARMCX6Q7L4S7 300 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 FBXO33Q7Z6M2 555 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 MORC1Q86VD1 984 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 EMILIN2Q9BXX0 1053 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 BCO2Q9BYV7 579 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 TMX4Q9H1E5 349 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 TUT1Q9H6E5 874 aaKnown RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 SP110Q9HB58 689 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 PRDM5Q9NQX1 630 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 THEGQ9P2T0 379 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 TRMT112Q9UI30 125 aaKnown RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 SMG5Q9UPR3 1016 aaKnown RBP5.04□□□□□ -1.6
VPS13B-208ENST00000521037 CAPN6Q9Y6Q1 641 aa5.04□□□□□ -1.6
VPS13B-208ENST00000521037 MYO3BQ8WXR4 1341 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 BAHCC1Q9P281 2608 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 SPTBN4Q9H254 2564 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 PI4K2BG5E9Z4 385 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 ENC1O14682 589 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 DIAPH1O60610 1272 aaKnown RBP5.03□□□□□ -1.6
VPS13B-208ENST00000521037 PAGE1O75459 146 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 LRIG2O94898 1065 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 RECKO95980 971 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 TMEM253P0C7T8 217 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 CETPP11597 493 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 SRFP11831 508 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 CAP2P40123 477 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 MRPS5P82675 430 aaKnown RBP5.03□□□□□ -1.6
VPS13B-208ENST00000521037 PPIL2Q13356 520 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 KIF22Q14807 665 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 TAF7Q15545 349 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-208ENST00000521037 SUPT20HL1Q3ZLR7 823 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 TMEM31Q5JXX7 168 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 COPS6Q7L5N1 327 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 GLYCTKQ8IVS8 523 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 TRIB2Q92519 343 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 ZKSCAN4Q969J2 545 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-208ENST00000521037 DRC1Q96MC2 740 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 ASB16Q96NS5 453 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 TMEM39BQ9GZU3 492 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 EPG5Q9HCE0 2579 aa5.03□□□□□ -1.6
VPS13B-208ENST00000521037 XDHP47989 1333 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ADAMTS20P59510 1910 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 TRIM43BA6NCK2 446 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 SNAP23O00161 211 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 U2AF1L5P0DN76 240 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 HOXD10P28358 340 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 PRKAR2BP31323 418 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 CTSWP56202 376 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 U2AF1Q01081 240 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 CFAP100Q494V2 611 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ERO1BQ86YB8 467 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 FAM177A1Q8N128 213 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 XAGE3Q8WTP9 111 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 TRIM43Q96BQ3 446 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ALPK1Q96QP1 1244 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 COA1Q9GZY4 146 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 FBRSQ9HAH7 460 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 DCP1AQ9NPI6 582 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ZNF70Q9UC06 446 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ZNF112Q9UJU3 913 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 MINPP1Q9UNW1 487 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 SPEGQ15772 3267 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 DOCK3Q8IZD9 2030 aa5.02□□□□□ -1.61
VPS13B-208ENST00000521037 TCF20Q9UGU0 1960 aaKnown RBP5.02□□□□□ -1.61
VPS13B-208ENST00000521037 ASPMQ8IZT6 3477 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 ZNF318Q5VUA4 2279 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 SMIM22K7EJ46 135 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 ESR1P03372 595 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 LINC00310P59036 64 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 ERVFC1P60507 584 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 SNAPC2Q13487 334 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 SNX17Q15036 470 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 DLGAP5Q15398 846 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 SF3A1Q15459 793 aaKnown RBP5.01□□□□□ -1.61
VPS13B-208ENST00000521037 RALGPS1Q5JS13 557 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 CDKAL1Q5VV42 579 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms