RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ME1P48163 572 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 KRT76Q01546 638 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 ZNF746Q6NUN9 644 aaPredicted RBP17.23■□□□□ 0.35
LSM1-203ENST00000520755 SHC4Q6S5L8 630 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 DTHD1Q6ZMT9 781 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
LSM1-203ENST00000520755 CUTAO60888 179 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 MIS18BP1Q6P0N0 1132 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
LSM1-203ENST00000520755 LMBRD1Q9NUN5 540 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 PCDHA12Q9UN75 941 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 DNAH12Q6ZR08 3092 aa17.22■□□□□ 0.35
LSM1-203ENST00000520755 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
LSM1-203ENST00000520755 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 BACH1O14867 736 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 F2P00734 622 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 SUPT20HL2P0C7V6 817 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 CDC25AP30304 524 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 PSEN2P49810 448 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 MFSD10Q14728 455 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 SLC39A5Q6ZMH5 540 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
LSM1-203ENST00000520755 KAT2BQ92831 832 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 GLG1Q92896 1179 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 PCDHA10Q9Y5I2 948 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
LSM1-203ENST00000520755 H3BRB1 525 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 ATG7O95352 703 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 PSAPP07602 524 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 SFNP31947 248 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 MCM4P33991 863 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 KIAA0753Q2KHM9 967 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 RESP18Q5W5W9 173 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 ABHD15Q6UXT9 468 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 SYMPKQ92797 1274 aaKnown RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 KATNAL1Q9BW62 490 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 AZI2Q9H6S1 392 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 DISC1Q9NRI5 854 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
LSM1-203ENST00000520755 GRIN2DO15399 1336 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
LSM1-203ENST00000520755 A0A087X0B3 334 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 A0A1W2PQ27 194 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 A0A1W2PQ64 194 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 A0A1W2PQD8 194 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 LGR5O75473 907 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 MARK3P27448 753 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 JAK3P52333 1124 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 PDIA5Q14554 519 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 CSPP1Q1MSJ5 1256 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 NBPF20Q3BBV1 942 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 FAM47CQ5HY64 1035 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 SWSAP1Q6NVH7 229 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 CCDC60Q8IWA6 550 aaPredicted RBP17.19■□□□□ 0.34
LSM1-203ENST00000520755 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 AK8Q96MA6 479 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 PCYT2Q99447 389 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 SMARCAD1Q9H4L7 1026 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
LSM1-203ENST00000520755 FAM237AA0A1B0GTK4 181 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 ARVCFO00192 962 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 STAT5BP51692 787 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 RTP1P59025 263 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 ECM1Q16610 540 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 UGCGQ16739 394 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 RDM1Q8NG50 284 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 ERAP1Q9NZ08 941 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 GABBR1Q9UBS5 961 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 HPSEQ9Y251 543 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 ATP11BQ9Y2G3 1177 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 TRIP12Q14669 1992 aaPredicted RBP17.18■□□□□ 0.34
LSM1-203ENST00000520755 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
LSM1-203ENST00000520755 MYH11P35749 1972 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 IGKV6D-21A0A0A0MT36 114 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 HAS3O00219 553 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
LSM1-203ENST00000520755 MED24O75448 989 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 SPATA31C1P0DKV0 1188 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms