RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 PCDH18Q9HCL0 1135 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 SRA1Q9HD15 236 aaKnown RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 HYPKQ9NX55 129 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 ATP10DQ9P241 1426 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 CPSF1Q10570 1443 aaKnown RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 A0A1W2PQ27 194 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 A0A1W2PQ64 194 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 A0A1W2PQD8 194 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 BAG3O95817 575 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 ESRRAP11474 423 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 TRPC1P48995 793 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 ST13P50502 369 aaKnown RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 IFT88Q13099 833 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF268Q14587 947 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF423Q2M1K9 1284 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 EMBQ6PCB8 327 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 MAATS1Q7Z4T9 603 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 ZBTB8BQ8NAP8 495 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 MYCBPAPQ8TBZ2 947 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 TSR2Q969E8 191 aaKnown RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 CCDC51Q96ER9 411 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 GDAP1L1Q96MZ0 367 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 BRD8Q9H0E9 1235 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 PUF60Q9UHX1 559 aaKnown RBP9.51□□□□□ -0.89
SHPRH-208ENST00000520752 SNX14Q9Y5W7 946 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 KNDC1Q76NI1 1749 aa9.51□□□□□ -0.89
SHPRH-208ENST00000520752 UNC13BO14795 1591 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 NPATQ14207 1427 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 GOLGA8AA7E2F4 631 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 M0R2C6 588 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SOX1O00570 391 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 BIRC5O15392 142 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 PRPF3O43395 683 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 HSF2BPO75031 334 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 PARP1P09874 1014 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 RHOXF2BP0C7M4 288 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 TROVE2P10155 538 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 TNFRSF8P28908 595 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 UBASH3AP57075 661 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 MRPS25P82663 173 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 ITIH3Q06033 890 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 IKBKEQ14164 716 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 TAF1CQ15572 869 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 PKN1Q16512 942 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 ARMC3Q5W041 872 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 CYB5RLQ6IPT4 315 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 FAM117BQ6P1L5 589 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 NOL8Q76FK4 1167 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 KIAA0825Q8IV33 1275 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 ENGASEQ8NFI3 743 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 KLHDC4Q8TBB5 520 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 AENQ8WTP8 325 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 IRGQQ8WZA9 623 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF653Q96CK0 615 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SMC6Q96SB8 1091 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 RHOXF2Q9BQY4 288 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SELENOOQ9BVL4 669 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 OSBPL1AQ9BXW6 950 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SOX17Q9H6I2 414 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SUGCTQ9HAC7 445 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 HAUS2Q9NVX0 235 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 ZNHIT6Q9NWK9 470 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 G3BP2Q9UN86 482 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
SHPRH-208ENST00000520752 SALL3Q9BXA9 1300 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 NEURL4Q96JN8 1562 aa9.5□□□□□ -0.89
SHPRH-208ENST00000520752 OVOS2A0A0G2JMS6 1433 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 OVOS2A0A0J9YW53 1432 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 OVOS2Q6IE36 1432 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CDC42BPBQ9Y5S2 1711 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-208ENST00000520752 LINC01387J3KSC0 135 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CYP27B1O15528 508 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 PPIP5K2O43314 1243 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-208ENST00000520752 RECKO95980 971 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 B3GALT4O96024 378 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CYP11B2P19099 503 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 MDH1P40925 334 aaKnown RBP9.49□□□□□ -0.89
SHPRH-208ENST00000520752 FAAP100Q0VG06 881 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 NCAPHQ15003 741 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 ACCSLQ4AC99 568 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CEP85Q6P2H3 762 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 OTUD6AQ7L8S5 288 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 RSPH3Q86UC2 560 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CCDC65Q8IXS2 484 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CACNA2D3Q8IZS8 1091 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 ATP11CQ8NB49 1132 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 SLC35B4Q969S0 331 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms