RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PIGOQ8TEQ8 1089 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 SLC5A5Q92911 643 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 DYDC2Q96IM9 177 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 CRACR2AQ9BSW2 395 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 FEM1BQ9UK73 627 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 TRAF3IP3Q9Y228 551 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 WNT10BO00744 389 aa28.39■■■□□ 2.14
COL13A1-213ENST00000520267 LDHDQ86WU2 507 aa28.39■■■□□ 2.14
COL13A1-213ENST00000520267 IFIH1Q9BYX4 1025 aaKnown RBP28.39■■■□□ 2.14
COL13A1-213ENST00000520267 DEF6Q9H4E7 631 aa28.39■■■□□ 2.14
COL13A1-213ENST00000520267 SH2D4AQ9H788 454 aa28.39■■■□□ 2.14
COL13A1-213ENST00000520267 CEP72Q9P209 647 aa28.39■■■□□ 2.14
COL13A1-213ENST00000520267 SHTN1A0MZ66 631 aa28.39■■■□□ 2.13
COL13A1-213ENST00000520267 SLITRK3O94933 977 aa28.39■■■□□ 2.13
COL13A1-213ENST00000520267 DEFB132Q7Z7B7 95 aa28.39■■■□□ 2.13
COL13A1-213ENST00000520267 APBA1Q02410 837 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 PPP2R5CQ13362 524 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 RINT1Q6NUQ1 792 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 TPH2Q8IWU9 490 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 MSANTD4Q8NCY6 345 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 TSGA10Q9BZW7 698 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 TUFT1Q9NNX1 390 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 FAM184BQ9ULE4 1060 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 AKR1B10O60218 316 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 SRGAP2O75044 1071 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 TBC1D8O95759 1140 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 PLA2G4AP47712 749 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 HGSNATQ68CP4 663 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 SECISBP2LQ93073 1101 aaKnown RBP28.38■■■□□ 2.13
COL13A1-213ENST00000520267 PNKPQ96T60 521 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 SAR1BQ9Y6B6 198 aa28.38■■■□□ 2.13
COL13A1-213ENST00000520267 MAP3K10Q02779 954 aa28.37■■■□□ 2.13
COL13A1-213ENST00000520267 ASTE1Q2TB18 679 aaPredicted RBP28.37■■■□□ 2.13
COL13A1-213ENST00000520267 ZBTB39O15060 712 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 TBCAO75347 108 aaKnown RBP28.36■■■□□ 2.13
COL13A1-213ENST00000520267 SASH3O75995 380 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 ARP10275 920 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 POLD1P28340 1107 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 TUBB4BP68371 445 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 CEP55Q53EZ4 464 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 NOA1Q8NC60 698 aaKnown RBP28.36■■■□□ 2.13
COL13A1-213ENST00000520267 ARFGAP3Q9NP61 516 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 USO1O60763 962 aaKnown RBP28.36■■■□□ 2.13
COL13A1-213ENST00000520267 ASNSP08243 561 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 INPP5BP32019 993 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 POLR2FP61218 127 aaKnown RBP28.36■■■□□ 2.13
COL13A1-213ENST00000520267 KCNH2Q12809 1159 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 ARHGAP27Q6ZUM4 889 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 EHMT1Q9H9B1 1298 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 ST7Q9NRC1 585 aa28.36■■■□□ 2.13
COL13A1-213ENST00000520267 CCDC151A5D8V7 595 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 SFI1A8K8P3 1242 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 TLR2O60603 784 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 RHOXF2BP0C7M4 288 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 PRELPP51888 382 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 MAPK8IP2Q13387 824 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-213ENST00000520267 KCTD17Q8N5Z5 321 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 AGBL1Q96MI9 1066 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 RHOXF2Q9BQY4 288 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 PDXKO00764 312 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 ATP8B1O43520 1251 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 GAS7O60861 476 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 PTGER2P43116 358 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 BRD3Q15059 726 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 BMT2Q1RMZ1 405 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 ZNF341Q9BYN7 854 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 MLXIPQ9HAP2 919 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 MYOZ2Q9NPC6 264 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 RAB21Q9UL25 225 aa28.35■■■□□ 2.13
COL13A1-213ENST00000520267 POTEB2H3BUK9 544 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 CALUO43852 315 aaPredicted RBP28.34■■■□□ 2.13
COL13A1-213ENST00000520267 GCNT3O95395 438 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 GFPT1Q06210 699 aaPredicted RBP28.34■■■□□ 2.13
COL13A1-213ENST00000520267 SFMBT2Q5VUG0 894 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 ASTN1O14525 1302 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 SSU72P8A0A1W2PR75 194 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 KCNA1Q09470 495 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 FRMD5Q7Z6J6 570 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 MMS19Q96T76 1030 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 ZNF577Q9BSK1 485 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 UNC45AQ9H3U1 944 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 CAPN6Q9Y6Q1 641 aa28.34■■■□□ 2.13
COL13A1-213ENST00000520267 ANO9A1A5B4 782 aa28.33■■■□□ 2.13
COL13A1-213ENST00000520267 PHF20L1A8MW92 1017 aa28.33■■■□□ 2.13
COL13A1-213ENST00000520267 EPS15P42566 896 aa28.33■■■□□ 2.13
COL13A1-213ENST00000520267 C1orf186Q6ZWK4 172 aa28.33■■■□□ 2.13
COL13A1-213ENST00000520267 SYN2Q92777 582 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-213ENST00000520267 NUCKS1Q9H1E3 243 aaKnown RBP28.33■■■□□ 2.13
COL13A1-213ENST00000520267 TYW1Q9NV66 732 aaKnown RBP28.33■■■□□ 2.13
COL13A1-213ENST00000520267 WRAP73Q9P2S5 460 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-213ENST00000520267 ZNF536O15090 1300 aa28.33■■■□□ 2.13
COL13A1-213ENST00000520267 MAGEA1P43355 309 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 RASA3Q14644 834 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 TDRD12Q587J7 1177 aaKnown RBP28.32■■■□□ 2.12
COL13A1-213ENST00000520267 CIAPIN1Q6FI81 312 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 GANQ9H2C0 597 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 AKAP3O75969 853 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 MOCS3O95396 460 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 CAPZA3Q96KX2 299 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 OLFML3Q9NRN5 406 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms