RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
SDC2-205ENST00000520233 RGL1Q9NZL6 768 aa19.97■□□□□ 0.79
SDC2-205ENST00000520233 GABBR1Q9UBS5 961 aa19.97■□□□□ 0.79
SDC2-205ENST00000520233 EMSYQ7Z589 1322 aa19.97■□□□□ 0.79
SDC2-205ENST00000520233 MYADML2A6NDP7 307 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 BACH1O14867 736 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 ZEB2O60315 1214 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 KPNA6O60684 536 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 DKC1O60832 514 aaKnown RBP eCLIP19.96■□□□□ 0.79
SDC2-205ENST00000520233 MED24O75448 989 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 LGALS2P05162 132 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 SPATA31C1P0DKV0 1188 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 QARSP47897 775 aaKnown RBP19.96■□□□□ 0.79
SDC2-205ENST00000520233 PSMC5P62195 406 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 BEX3Q00994 111 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 GNASQ5JWF2 1037 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 HYIQ5T013 277 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 UTP14CQ5TAP6 766 aaKnown RBP19.96■□□□□ 0.79
SDC2-205ENST00000520233 COL13A1Q5TAT6 717 aaPredicted RBP19.96■□□□□ 0.79
SDC2-205ENST00000520233 PLPPR4Q7Z2D5 763 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 RNF180Q86T96 592 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 CATSPER3Q86XQ3 398 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 BANK1Q8NDB2 785 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 AFAP1L1Q8TED9 768 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 ATP6V0A1Q93050 837 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 DEFB118Q96PH6 123 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 AZI2Q9H6S1 392 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 MAFBQ9Y5Q3 323 aaPredicted RBP19.96■□□□□ 0.79
SDC2-205ENST00000520233 KDM3AQ9Y4C1 1321 aa19.96■□□□□ 0.79
SDC2-205ENST00000520233 GJB1P08034 283 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 STAT5BP51692 787 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 UBE2HP62256 183 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 CYP4A11Q02928 519 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 CTTNQ14247 550 aaKnown RBP19.95■□□□□ 0.78
SDC2-205ENST00000520233 LRRC41Q15345 812 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 CCSAPQ6IQ19 270 aaPredicted RBP19.95■□□□□ 0.78
SDC2-205ENST00000520233 TPH2Q8IWU9 490 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 PCSK9Q8NBP7 692 aaKnown RBP19.95■□□□□ 0.78
SDC2-205ENST00000520233 ARRDC4Q8NCT1 418 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 CALML4Q96GE6 196 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 LXNQ9BS40 222 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 C16orf70Q9BSU1 422 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 SMARCAD1Q9H4L7 1026 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 ZSWIM4Q9H7M6 989 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 LMBRD1Q9NUN5 540 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 CCDC39Q9UFE4 941 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 OGDHLQ9ULD0 1010 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 IGSF9BQ9UPX0 1349 aa19.95■□□□□ 0.78
SDC2-205ENST00000520233 FAM237AA0A1B0GTK4 181 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 GADD45BO75293 160 aaPredicted RBP19.94■□□□□ 0.78
SDC2-205ENST00000520233 LYPLA2O95372 231 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 MYL3P08590 195 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 MCM4P33991 863 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 SLC26A2P50443 739 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 GRB10Q13322 594 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 UGCGQ16739 394 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 C4orf19Q8IY42 314 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 KCTD17Q8N5Z5 321 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 MRPS27Q92552 414 aaKnown RBP19.94■□□□□ 0.78
SDC2-205ENST00000520233 GLG1Q92896 1179 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 CDK5RAP3Q96JB5 506 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 NT5C3AQ9H0P0 336 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 HPSEQ9Y251 543 aa19.94■□□□□ 0.78
SDC2-205ENST00000520233 POTEB3A0JP26 581 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 SGPL1O95470 568 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 PURAQ00577 322 aaKnown RBP19.93■□□□□ 0.78
SDC2-205ENST00000520233 KARSQ15046 597 aaKnown RBP19.93■□□□□ 0.78
SDC2-205ENST00000520233 KCNA10Q16322 511 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 ECM1Q16610 540 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 TPRNQ4KMQ1 711 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 TMEM119Q4V9L6 283 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 PDXDC2PQ6P474 469 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 POTEBQ6S5H4 581 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 FSIP1Q8NA03 581 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 PNMA5Q96PV4 448 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 TSEN34Q9BSV6 310 aaKnown RBP19.93■□□□□ 0.78
SDC2-205ENST00000520233 CRISPLD2Q9H0B8 497 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 ERAP1Q9NZ08 941 aa19.93■□□□□ 0.78
SDC2-205ENST00000520233 WRAP73Q9P2S5 460 aaPredicted RBP19.93■□□□□ 0.78
SDC2-205ENST00000520233 ZNF215Q9UL58 517 aaPredicted RBP19.93■□□□□ 0.78
SDC2-205ENST00000520233 A0A1B0GVL5 298 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 ZNF862O60290 1169 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 MYCNP04198 464 aaPredicted RBP19.92■□□□□ 0.78
SDC2-205ENST00000520233 ZNF286BP0CG31 522 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 PFKFB1P16118 471 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 CAPN2P17655 700 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 ATP4AP20648 1035 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
SDC2-205ENST00000520233 TRIM50Q86XT4 487 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 RASSF8Q8NHQ8 419 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 U2AF1L4Q8WU68 220 aaKnown RBP19.92■□□□□ 0.78
SDC2-205ENST00000520233 PYM1Q9BRP8 204 aaKnown RBP19.92■□□□□ 0.78
SDC2-205ENST00000520233 GOLPH3LQ9H4A5 285 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 DDX19AQ9NUU7 478 aaKnown RBP19.92■□□□□ 0.78
SDC2-205ENST00000520233 KCNH3Q9ULD8 1083 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 KIAA1024Q9UPX6 916 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 FRMPD3Q5JV73 1810 aa19.92■□□□□ 0.78
SDC2-205ENST00000520233 A0A087X0B3 334 aa19.91■□□□□ 0.78
SDC2-205ENST00000520233 MOXD2PA6NHM9 499 aa19.91■□□□□ 0.78
SDC2-205ENST00000520233 H3BRB1 525 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms