RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 TSGA10IPQ3SY00 556 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 FCHSD1Q86WN1 690 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 SRBD1Q8N5C6 995 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 DBF4BQ8NFT6 615 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 CTCFLQ8NI51 663 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 ARNTL2Q8WYA1 636 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 ATP6V0A1Q93050 837 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 RRP36Q96EU6 259 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 CDHR1Q96JP9 859 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 SAMD11Q96NU1 681 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 TGS1Q96RS0 853 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 UHRF1Q96T88 793 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 LSG1Q9H089 658 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 RBM8AQ9Y5S9 174 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 MUC3AQ02505 3323 aa6.51□□□□□ -1.37
CTNNA1-219ENST00000520158 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 KAT6AQ92794 2004 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 MBLAC1A4D2B0 266 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SH2B2O14492 632 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 TREHO43280 583 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 PRC1O43663 620 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 AMHP03971 560 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 RPLP2P05387 115 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 HSP90AA1P07900 732 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 KCNA2P16389 499 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 ITGB5P18084 799 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 THPOP40225 353 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 TFF2Q03403 129 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 COL19A1Q14993 1142 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.5□□□□□ -1.377e-6■■■□□ 15.2
CTNNA1-219ENST00000520158 CYFIP1Q7L576 1253 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 NLRX1Q86UT6 975 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SGMS1Q86VZ5 419 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 FANCBQ8NB91 859 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SMARCC2Q8TAQ2 1214 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SEPT1Q8WYJ6 367 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SEPT8Q92599 483 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 APBB2Q92870 758 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 CUL5Q93034 780 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 HLA-CQ95604 372 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 ZBED2Q9BTP6 218 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 PSTPIP2Q9H939 334 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 EHMT1Q9H9B1 1298 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 RTEL1Q9NZ71 1219 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 PLA2G2EQ9NZK7 142 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 UBIAD1Q9Y5Z9 338 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 SQORQ9Y6N5 450 aa6.5□□□□□ -1.37
CTNNA1-219ENST00000520158 TCF20Q9UGU0 1960 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 GSTTP1A0A1W2PQM5 241 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 C5orf67F2Z3F1 127 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 H3BNC9 293 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 NOP56O00567 594 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 SLC27A2O14975 620 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 ATP9AO75110 1047 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 CHRNA1P02708 482 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 KCNQ1P51787 676 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 EXOSC10Q01780 885 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 MGAT3Q09327 533 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 LEXMQ3ZCV2 418 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 KRT40Q6A162 431 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 TAF2Q6P1X5 1199 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 USP17L6PQ6QN14 398 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 CASC1Q6TDU7 716 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 TMTC3Q6ZXV5 915 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 SPRED2Q7Z698 418 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 TMCO2Q7Z6W1 182 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 ESYT1Q9BSJ8 1104 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 C1QTNF1Q9BXJ1 281 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 JADE2Q9NQC1 790 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 SETD4Q9NVD3 440 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 SEC63Q9UGP8 760 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 ZNF215Q9UL58 517 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 SH3BP1Q9Y3L3 701 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 TELO2Q9Y4R8 837 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 DOCK5Q9H7D0 1870 aa6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 COL4A4P53420 1690 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-219ENST00000520158 RALGAPA2Q2PPJ7 1873 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 IGKV6D-21A0A0A0MT36 114 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 CCDC69A6NI79 296 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 RRN3P2A6NIE6 340 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 hCG_1984214I3L0E3 225 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 ATG7O95352 703 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 PLEKHA8P1O95397 391 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 RB1P06400 928 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 LINC00271P0C7V0 271 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 TCF7P36402 384 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 RCAN1P53805 252 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 FUT2Q10981 343 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 COL9A3Q14050 684 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 PUS10Q3MIT2 529 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms