RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C16orf92Q96LL3 132 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 NUP88Q99567 741 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 AP5M1Q9H0R1 490 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 SP110Q9HB58 689 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 MYOTQ9UBF9 498 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 ASH2LQ9UBL3 628 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 GOLGA8AA7E2F4 631 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 GOLGA8BA8MQT2 603 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 SRGAP3O43295 1099 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 BUB1BO60566 1050 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 HPXP02790 462 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 PTPN1P18031 435 aaKnown RBP6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 TACR1P25103 407 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 GPR3P46089 330 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 SCAND1P57086 179 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 CYP4F8P98187 520 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 ADCY1Q08828 1119 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 SEC23AQ15436 765 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 LILRA2Q8N149 483 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 TTLL11Q8NHH1 800 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 NOB1Q9ULX3 412 aaKnown RBP6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 PCDHB4Q9Y5E5 795 aa6.97□□□□□ -1.29
HMGB1P46-201ENST00000520062 KLHL33A6NCF5 533 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 SLC27A2O14975 620 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 C4BPAP04003 597 aaKnown RBP6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 KRT18P05783 430 aaKnown RBP6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 FUT4P22083 530 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 CYP2C19P33261 490 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 HK2P52789 917 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 HERVK_113P62684 666 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 TUSC3Q13454 348 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 TMEM132BQ14DG7 1078 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 SNX17Q15036 470 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 PRSS36Q5K4E3 855 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 BTBD8Q5XKL5 378 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 BICRALQ6AI39 1079 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 NLRX1Q86UT6 975 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 CMTR2Q8IYT2 770 aaKnown RBP6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 NUDT5Q9UKK9 219 aa6.96□□□□□ -1.3
HMGB1P46-201ENST00000520062 FAM90A27PA6NNH2 459 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 PLIN1O60240 522 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 PF4V1P10720 104 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 PNLIPP16233 465 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 GDNFP39905 211 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 ARL4AP40617 200 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 MOGSQ13724 837 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 GTF2H3Q13889 308 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 PDCD1Q15116 288 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 CATSPEREQ5SY80 951 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 WNT8AQ9H1J5 351 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 RC3H2Q9HBD1 1191 aaKnown RBP6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 CCM2LQ9NUG4 571 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 CCDC39Q9UFE4 941 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 KCNG1Q9UIX4 513 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 TELO2Q9Y4R8 837 aa6.95□□□□□ -1.3
HMGB1P46-201ENST00000520062 FOXP2O15409 715 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PRPF3O43395 683 aaKnown RBP6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 IGHA1P01876 353 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 LTFP02788 710 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 MYL1P05976 194 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 MAP9Q49MG5 647 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 MINDY4Q4G0A6 757 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 EFCAB2Q5VUJ9 269 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZNF574Q6ZN55 896 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 DGKHQ86XP1 1220 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 CMIPQ8IY22 773 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 HSPBAP1Q96EW2 488 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PEX11GQ96HA9 241 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 MS4A5Q9H3V2 200 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 ARNT2Q9HBZ2 717 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 TNFRSF12AQ9NP84 129 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 RIC8BQ9NVN3 520 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 MSRAQ9UJ68 235 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 INVSQ9Y283 1065 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA9Q9Y5G4 932 aaKnown RBP6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA8Q9Y5G5 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA3Q9Y5H0 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 PCDHGA2Q9Y5H1 932 aa6.94□□□□□ -1.3
HMGB1P46-201ENST00000520062 TCRBV5S2A0A599 114 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 PLEKHD1A6NEE1 506 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 KIAA1324LA8MWY0 1029 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 SGSM2O43147 1006 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 XPOTO43592 962 aaKnown RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 H2AFYO75367 372 aaKnown RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZBTB7AO95365 584 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 CYBBP04839 570 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 RAC2P15153 192 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 SPINK2P20155 84 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 ENPP1P22413 925 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 TCIRG1Q13488 830 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms