RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TBX3O15119 743 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 ATG7O95352 703 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 CD4P01730 458 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 PSAPP07602 524 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 STAT5BP51692 787 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 JAK3P52333 1124 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 PTPN11Q06124 597 aaPredicted RBP13.36□□□□□ -0.27
HPS4-218ENST00000519774 PTGISQ16647 500 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
HPS4-218ENST00000519774 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 FAM20AQ96MK3 541 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 RNPEPQ9H4A4 650 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 ZNF302Q9NR11 478 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 TRPC6Q9Y210 931 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 PCDHA10Q9Y5I2 948 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
HPS4-218ENST00000519774 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
HPS4-218ENST00000519774 TRIP12Q14669 1992 aaPredicted RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 C17orf102A2RUQ5 167 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 CYP2C9P11712 490 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 SFNP31947 248 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 BECN1Q14457 450 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
HPS4-218ENST00000519774 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
HPS4-218ENST00000519774 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 CEP290O15078 2479 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 EML1O00423 815 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 STX6O43752 255 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 RAG1P15918 1043 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 TXKP42681 527 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 IGBP1P78318 339 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 HIC1Q14526 733 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 PLPPR4Q7Z2D5 763 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
HPS4-218ENST00000519774 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
HPS4-218ENST00000519774 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
HPS4-218ENST00000519774 RESTQ13127 1097 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 GRIK4Q16099 956 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 UGCGQ16739 394 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
HPS4-218ENST00000519774 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
HPS4-218ENST00000519774 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
HPS4-218ENST00000519774 NOC4LQ9BVI4 516 aaKnown RBP13.33□□□□□ -0.28
HPS4-218ENST00000519774 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
HPS4-218ENST00000519774 POTEMA6NI47 508 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 TREHO43280 583 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 GNAT1P11488 350 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 INSRRP14616 1297 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 ITGB8P26012 769 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 CYP2C18P33260 490 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
HPS4-218ENST00000519774 SLC26A2P50443 739 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 PRKCEQ02156 737 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 PTGDRQ13258 359 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 TMEM266Q2M3C6 531 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
HPS4-218ENST00000519774 CCDC155Q8N6L0 562 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 BADQ92934 168 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms