RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 EPHA7Q15375 998 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-210ENST00000519362 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 MCF2L2Q86YR7 1114 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 TPH2Q8IWU9 490 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 UBXN4Q92575 508 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
SPIDR-210ENST00000519362 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-210ENST00000519362 CDC23Q9UJX2 597 aa13.67□□□□□ -0.22
SPIDR-210ENST00000519362 FRMPD4Q14CM0 1322 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 CTAGE9A4FU28 777 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 CETN3O15182 167 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
SPIDR-210ENST00000519362 MYBP10242 640 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 GAP43P17677 238 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 VCAM1P19320 739 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 NR2F2P24468 414 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 NBPF12Q5TAG4 269 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-210ENST00000519362 RSRC2Q7L4I2 434 aaKnown RBP13.66□□□□□ -0.22
SPIDR-210ENST00000519362 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-210ENST00000519362 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 ARHGAP20Q9P2F6 1191 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 WRAP73Q9P2S5 460 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-210ENST00000519362 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 FAM184BQ9ULE4 1060 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
SPIDR-210ENST00000519362 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 NOL4O94818 638 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
SPIDR-210ENST00000519362 MTMR2Q13614 643 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 NEK11Q8NG66 645 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 SMCR8Q8TEV9 937 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-210ENST00000519362 NACC1Q96RE7 527 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-210ENST00000519362 TANGO6Q9C0B7 1094 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 BCAS3Q9H6U6 928 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
SPIDR-210ENST00000519362 KCND2Q9NZV8 630 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPIDR-210ENST00000519362 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 ASTN1O14525 1302 aa13.65□□□□□ -0.22
SPIDR-210ENST00000519362 ZNF263O14978 683 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 ZBTB39O15060 712 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 DHX15O43143 795 aaKnown RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 FLOT1O75955 427 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 LCA5LO95447 670 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 ZNF131P52739 623 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 USP14P54578 494 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 IL31RAQ8NI17 732 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 NEK9Q8TD19 979 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 CCDC42Q96M95 316 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 LACRTQ9GZZ8 138 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 RAVER2Q9HCJ3 691 aaKnown RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 GUCA1BQ9UMX6 200 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 UBIAD1Q9Y5Z9 338 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 RCCD1A6NED2 376 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 EIF3DO15371 548 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 KRT86O43790 486 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 CALUO43852 315 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 ALAS1P13196 640 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 MRPS9P82933 396 aaKnown RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 AMPD2Q01433 879 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 RRAGAQ7L523 313 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 SCYL3Q8IZE3 742 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 LXNQ9BS40 222 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-210ENST00000519362 CEP72Q9P209 647 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 TFR2Q9UP52 801 aa13.64□□□□□ -0.23
SPIDR-210ENST00000519362 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 TGFB1I1O43294 461 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 IPO7O95373 1038 aaKnown RBP13.63□□□□□ -0.23
SPIDR-210ENST00000519362 GCNT3O95395 438 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 FDX1P10109 184 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 VAV2P52735 878 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 BACE1P56817 501 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 SPP2Q13103 211 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 NFIL3Q16649 462 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 ASTE1Q2TB18 679 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-210ENST00000519362 TKFCQ3LXA3 575 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
SPIDR-210ENST00000519362 KIAA1328Q86T90 577 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms