RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 FNIP1Q8TF40 1166 aa7.61□□□□□ -1.19
SQLE-203ENST00000518931 DACT3Q96B18 629 aaPredicted RBP7.61□□□□□ -1.19
SQLE-203ENST00000518931 TOX2Q96NM4 488 aa7.61□□□□□ -1.19
SQLE-203ENST00000518931 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
SQLE-203ENST00000518931 PDGFDQ9GZP0 370 aaPredicted RBP7.61□□□□□ -1.19
SQLE-203ENST00000518931 RIC8BQ9NVN3 520 aa7.61□□□□□ -1.19
SQLE-203ENST00000518931 ATP23Q9Y6H3 246 aa7.61□□□□□ -1.19
SQLE-203ENST00000518931 FAM90A27PA6NNH2 459 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 ACOT7O00154 380 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 PPFIA4O75335 1185 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 PTPN1P18031 435 aaKnown RBP7.6□□□□□ -1.19
SQLE-203ENST00000518931 NEK4P51957 841 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 LRRC56Q8IYG6 542 aaPredicted RBP7.6□□□□□ -1.19
SQLE-203ENST00000518931 PMM1Q92871 262 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 ZBTB8AQ96BR9 441 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 C11orf84Q9BUA3 381 aaPredicted RBP7.6□□□□□ -1.19
SQLE-203ENST00000518931 PCDH18Q9HCL0 1135 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 RBPJLQ9UBG7 517 aa7.6□□□□□ -1.19
SQLE-203ENST00000518931 SLC12A8A0AV02 714 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 CLASP2O75122 1294 aaKnown RBP7.59□□□□□ -1.19
SQLE-203ENST00000518931 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.199e-12■□□□□ 8.5
SQLE-203ENST00000518931 AFF3P51826 1226 aaKnown RBP7.59□□□□□ -1.19
SQLE-203ENST00000518931 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
SQLE-203ENST00000518931 VMACQ2NL98 169 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 FIGNQ5HY92 759 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 ZFYVE27Q5T4F4 411 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 CPZQ66K79 652 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 HHIPL2Q6UWX4 724 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 CNPY4Q8N129 248 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 DDX1Q92499 740 aaKnown RBP7.59□□□□□ -1.19
SQLE-203ENST00000518931 MFSD3Q96ES6 412 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 PCGF6Q9BYE7 350 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 HSPBP1Q9NZL4 362 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 WASF3Q9UPY6 502 aa7.59□□□□□ -1.19
SQLE-203ENST00000518931 TRAF5O00463 557 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 SCDO00767 359 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 MECP2P51608 486 aaKnown RBP7.58□□□□□ -1.2
SQLE-203ENST00000518931 HTRA3P83110 453 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 TM4SF20Q53R12 229 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 TMC5Q6UXY8 1006 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 ZSCAN18Q8TBC5 510 aaPredicted RBP7.58□□□□□ -1.2
SQLE-203ENST00000518931 SLKQ9H2G2 1235 aaPredicted RBP7.58□□□□□ -1.2
SQLE-203ENST00000518931 CABP5Q9NP86 173 aa7.58□□□□□ -1.2
SQLE-203ENST00000518931 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.57□□□□□ -1.2
SQLE-203ENST00000518931 FAM83GA6ND36 823 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 KPNA6O60684 536 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 ITGA1P56199 1179 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 SEC23AQ15436 765 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 ARHGAP44Q17R89 818 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 TCERG1LQ5VWI1 586 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 PROSER1Q86XN7 944 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 TMEM151BQ8IW70 566 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 KYQ8NBH2 561 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 PNISRQ8TF01 805 aaKnown RBP7.57□□□□□ -1.2
SQLE-203ENST00000518931 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
SQLE-203ENST00000518931 MTFR1LQ9H019 292 aa7.57□□□□□ -1.2
SQLE-203ENST00000518931 SPATA6Q9NWH7 488 aaPredicted RBP7.57□□□□□ -1.2
SQLE-203ENST00000518931 PTPDC1A2A3K4 754 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 KRT37O76014 449 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 ENO2P09104 434 aaPredicted RBP7.56□□□□□ -1.2
SQLE-203ENST00000518931 ZBTB48P10074 688 aaPredicted RBP7.56□□□□□ -1.2
SQLE-203ENST00000518931 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
SQLE-203ENST00000518931 GJA4P35212 333 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 ADAM9Q13443 819 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 PCBP1Q15365 356 aaKnown RBP eCLIP7.56□□□□□ -1.2
SQLE-203ENST00000518931 WDR78Q5VTH9 848 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 PKN3Q6P5Z2 889 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 LIPIQ6XZB0 460 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 OTOP1Q7RTM1 612 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 SAPCD2Q86UD0 394 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 C1QL4Q86Z23 238 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 NOSTRINQ8IVI9 506 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 TTLL6Q8N841 843 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 CHST14Q8NCH0 376 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
SQLE-203ENST00000518931 A0A087X0B3 334 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 CBX4O00257 560 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 FFAR3O14843 346 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
SQLE-203ENST00000518931 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
SQLE-203ENST00000518931 IRF9Q00978 393 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 PFKPQ01813 784 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 C4orf46Q504U0 113 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 CD276Q5ZPR3 534 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 VASNQ6EMK4 673 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 KRBA2Q6ZNG9 492 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 TSHZ1Q6ZSZ6 1077 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 ADGRG2Q8IZP9 1017 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 FAM9BQ8IZU0 186 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 AHI1Q8N157 1196 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 ZSWIM3Q96MP5 696 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 BOCQ9BWV1 1114 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 MAF1Q9H063 256 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 B4GALT6Q9UBX8 382 aa7.55□□□□□ -1.2
SQLE-203ENST00000518931 PRAMEF25A6NGN4 478 aa7.54□□□□□ -1.2
SQLE-203ENST00000518931 HIP1RO75146 1068 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms