RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PSMC6P62333 389 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 FANCCQ00597 558 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 COASYQ13057 564 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 C4orf19Q8IY42 314 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 TRMT44Q8IYL2 757 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 GUF1Q8N442 669 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 HSD3B7Q9H2F3 369 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 DOCK5Q9H7D0 1870 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 MYH9P35579 1960 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 MYH11P35749 1972 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 ASTN1O14525 1302 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 UTRNP46939 3433 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 TBCAO75347 108 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 SERPINC1P01008 464 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 PSAPP07602 524 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 SLC10A3P09131 477 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 STK4Q13043 487 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 GIT2Q14161 759 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 NEDD9Q14511 834 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 DRC7Q8IY82 874 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 ATP6V0A1Q93050 837 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 CTAGE1Q96RT6 745 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 TLL2Q9Y6L7 1015 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 ZNF236Q9UL36 1845 aa16.74■□□□□ 0.27
TRAPPC9-205ENST00000518839 MAPK4P31152 587 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 STX17P56962 302 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 RINT1Q6NUQ1 792 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 MIS18BP1Q6P0N0 1132 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 KIAA0895Q8NCT3 520 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 P2RX5Q93086 422 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 MED15Q96RN5 788 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 PTPN18Q99952 460 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 TIPINQ9BVW5 301 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 PORCNQ9H237 461 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 EFCC1Q9HA90 598 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 SLC39A2Q9NP94 309 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 ANKEF1Q9NU02 776 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 COL4A3BPQ9Y5P4 624 aa16.73■□□□□ 0.27
TRAPPC9-205ENST00000518839 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 CCNE2O96020 404 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 UBASH3AP57075 661 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 C1orf186Q6ZWK4 172 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 FAM114A1Q8IWE2 563 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 MYOCDQ8IZQ8 938 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 TSG101Q99816 390 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 REEP2Q9BRK0 252 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
TRAPPC9-205ENST00000518839 ARID2Q68CP9 1835 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 FAM13AO94988 1023 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 PGK2P07205 417 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 ATP1A3P13637 1013 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 GUCY2CP25092 1073 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 CENPPQ6IPU0 288 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 FGD4Q96M96 766 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 RUSC1Q9BVN2 902 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 XPO4Q9C0E2 1151 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 THAP9Q9H5L6 903 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 WRAP73Q9P2S5 460 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 DIS3Q9Y2L1 958 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 MCM3APO60318 1980 aa16.71■□□□□ 0.27
TRAPPC9-205ENST00000518839 NPHP3-ACAD11A0A0J9YXS1 232 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 ACTR2P61160 394 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZNF792Q3KQV3 632 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 TTI2Q6NXR4 508 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZHX3Q9H4I2 956 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 OLFML3Q9NRN5 406 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms