RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ZNF200P98182 395 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-217ENST00000518538 RDM1Q8NG50 284 aa24.83■■□□□ 1.57
VEGFA-217ENST00000518538 ZNF302Q9NR11 478 aa24.83■■□□□ 1.57
VEGFA-217ENST00000518538 NRCAMQ92823 1304 aa24.83■■□□□ 1.56
VEGFA-217ENST00000518538 CEP290O15078 2479 aa24.83■■□□□ 1.56
VEGFA-217ENST00000518538 H3BQV1 296 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 WNT7AO00755 349 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 CHMP2AO43633 222 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 CYP2C18P33260 490 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 PTK7Q13308 1070 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 BFSP2Q13515 415 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 SWSAP1Q6NVH7 229 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 B3GNT9Q6UX72 402 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 CCDC155Q8N6L0 562 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 CAGE1Q8TC20 777 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 HAS1Q92839 578 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 TNPO1Q92973 898 aaKnown RBP24.82■■□□□ 1.56
VEGFA-217ENST00000518538 ATP6V0A1Q93050 837 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 UBE2OQ9C0C9 1292 aaKnown RBP24.82■■□□□ 1.56
VEGFA-217ENST00000518538 DISC1Q9NRI5 854 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 SETD4Q9NVD3 440 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 UMODL1Q5DID0 1318 aa24.82■■□□□ 1.56
VEGFA-217ENST00000518538 PITPNM1O00562 1244 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 BAG4O95429 457 aaKnown RBP24.81■■□□□ 1.56
VEGFA-217ENST00000518538 TRAPPC10P48553 1259 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 ADAM17P78536 824 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 FPGSQ05932 587 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 PPFIA1Q13136 1202 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 PLCB4Q15147 1175 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 LARP1BQ659C4 914 aaKnown RBP24.81■■□□□ 1.56
VEGFA-217ENST00000518538 PDXDC2PQ6P474 469 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 HSCBQ8IWL3 235 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 SLFN12Q8IYM2 578 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 TMEM199Q8N511 208 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 LMBR1Q8WVP7 490 aa24.81■■□□□ 1.56
VEGFA-217ENST00000518538 DHX38Q92620 1227 aaKnown RBP24.81■■□□□ 1.56
VEGFA-217ENST00000518538 MAFBQ9Y5Q3 323 aaPredicted RBP24.81■■□□□ 1.56
VEGFA-217ENST00000518538 MARCH6O60337 910 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 NEMFO60524 1076 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 RBL2Q08999 1139 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 PPP2R5CQ13362 524 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 GRIK4Q16099 956 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 CALCRLQ16602 461 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 MIER3Q7Z3K6 550 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 SERINC5Q86VE9 423 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 WNT8AQ9H1J5 351 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 VAV3Q9UKW4 847 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 NOL7Q9UMY1 257 aaKnown RBP24.8■■□□□ 1.56
VEGFA-217ENST00000518538 TRPC6Q9Y210 931 aa24.8■■□□□ 1.56
VEGFA-217ENST00000518538 A0A1W2PPC1 479 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 POTEB3A0JP26 581 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 TREHO43280 583 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 ATP2B1P20020 1258 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 MCM7P33993 719 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 ORC2Q13416 577 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-217ENST00000518538 PPIGQ13427 754 aaKnown RBP eCLIP24.79■■□□□ 1.562e-7■■□□□ 12
VEGFA-217ENST00000518538 MCTP1Q6DN14 999 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 POTEBQ6S5H4 581 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 RETREG2Q8NC44 543 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 GABBR1Q9UBS5 961 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 IGSF9BQ9UPX0 1349 aa24.79■■□□□ 1.56
VEGFA-217ENST00000518538 RRN3P2A6NIE6 340 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 INSRRP14616 1297 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 CSF2RAP15509 400 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 PDCP20941 246 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 CCL23P55773 120 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 TTC38Q5R3I4 469 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 ATP8B4Q8TF62 1192 aa24.78■■□□□ 1.56
VEGFA-217ENST00000518538 HBP1O60381 514 aa24.77■■□□□ 1.56
VEGFA-217ENST00000518538 ATP4AP20648 1035 aa24.77■■□□□ 1.56
VEGFA-217ENST00000518538 TRIM71Q2Q1W2 868 aaKnown RBP24.77■■□□□ 1.56
VEGFA-217ENST00000518538 CKAP2LQ8IYA6 745 aa24.77■■□□□ 1.56
VEGFA-217ENST00000518538 WNT8BQ93098 351 aa24.77■■□□□ 1.56
VEGFA-217ENST00000518538 MTMR9Q96QG7 549 aa24.77■■□□□ 1.56
VEGFA-217ENST00000518538 MBLAC1A4D2B0 266 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-217ENST00000518538 IQCF3P0C7M6 154 aa24.76■■□□□ 1.55
VEGFA-217ENST00000518538 CKBP12277 381 aa24.76■■□□□ 1.55
VEGFA-217ENST00000518538 ZNF174Q15697 407 aa24.76■■□□□ 1.55
VEGFA-217ENST00000518538 TDHQ8IZJ6 230 aa24.76■■□□□ 1.55
VEGFA-217ENST00000518538 BBXQ8WY36 941 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-217ENST00000518538 TUBE1Q9UJT0 475 aa24.76■■□□□ 1.55
VEGFA-217ENST00000518538 EML1O00423 815 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 SELPP16109 830 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 EPHB4P54760 987 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 IGBP1P78318 339 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 SPIRE1Q08AE8 756 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 UGCGQ16739 394 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 MARCH8Q5T0T0 291 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 SCLYQ96I15 445 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 FAM167AQ96KS9 214 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 TMEM60Q9H2L4 133 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 IL23AQ9NPF7 189 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 FOXD4L1Q9NU39 408 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 PCDHA12Q9UN75 941 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 TANC1Q9C0D5 1861 aa24.75■■□□□ 1.55
VEGFA-217ENST00000518538 ZNF862O60290 1169 aa24.74■■□□□ 1.55
VEGFA-217ENST00000518538 CAND2O75155 1236 aa24.74■■□□□ 1.55
VEGFA-217ENST00000518538 RFC2P35250 354 aa24.74■■□□□ 1.55
VEGFA-217ENST00000518538 TOB1P50616 345 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-217ENST00000518538 TAF2Q6P1X5 1199 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms