RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 DNAJB1P25685 340 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 AVPR2P30518 371 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 MRPS9P82933 396 aaKnown RBP13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 SP4Q02446 784 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 MGAT3Q09327 533 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 RUFY4Q6ZNE9 571 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 RBM23Q86U06 439 aaKnown RBP13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 TLE6Q9H808 572 aa13.51□□□□□ -0.25
TMEM55A-202ENST00000518359 M0QZ92 97 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 GLP2RO95838 553 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 IER5Q5VY09 327 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 ASIC4Q96FT7 647 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 LRFN2Q9ULH4 789 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 SQORQ9Y6N5 450 aa13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 FNDC1Q4ZHG4 1894 aaPredicted RBP13.5□□□□□ -0.25
TMEM55A-202ENST00000518359 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 UBE3AQ05086 875 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 GRIK4Q16099 956 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 XRRA1Q6P2D8 792 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 NLRX1Q86UT6 975 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 PIGSQ96S52 555 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 AAASQ9NRG9 546 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 PCDHB12Q9Y5F1 795 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 MYO15AQ9UKN7 3530 aa13.49□□□□□ -0.25
TMEM55A-202ENST00000518359 PNMA6FA0A0J9YX94 578 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 PROB1E7EW31 1015 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 H0Y858 1186 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 SCG2P13521 617 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 SDSP20132 328 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 CD52P31358 61 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 PCNX4Q63HM2 1172 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 FAM43BQ6ZT52 329 aaPredicted RBP13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 LINC01599Q8WXQ3 324 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 SUSD6Q92537 303 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 GLG1Q92896 1179 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 CUL5Q93034 780 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
TMEM55A-202ENST00000518359 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 MARK3P27448 753 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 PAK2Q13177 524 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 SPOUT1Q5T280 376 aaKnown RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 PDE12Q6L8Q7 609 aaKnown RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 CWC27Q6UX04 472 aaKnown RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 ATP8B4Q8TF62 1192 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 DSCC1Q9BVC3 393 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 PTPRZ1P23471 2315 aaPredicted RBP13.47□□□□□ -0.25
TMEM55A-202ENST00000518359 HIP1O00291 1037 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 PER2O15055 1255 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 IGBP1P78318 339 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 GRM4Q14833 912 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 SEC23AQ15436 765 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 DUSP6Q16828 381 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 GPRASP2Q96D09 838 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
TMEM55A-202ENST00000518359 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
TMEM55A-202ENST00000518359 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
TMEM55A-202ENST00000518359 ERICH2A1L162 156 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms