RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TBX3O15119 743 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 FBXO24O75426 580 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 MAP3K6O95382 1288 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CHGBP05060 677 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 APPP05067 770 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 PTMAP06454 111 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 ZFYP08048 801 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 RARAP10276 462 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 HOXD8P13378 290 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 NFKB1P19838 968 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CNGA1P29973 690 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ADD2P35612 726 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 GRIA4P48058 902 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 IREB2P48200 963 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 ZNF157P51786 506 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 CTBSQ01459 385 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 MCL1Q07820 350 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SIM2Q14190 667 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 MAPRE1Q15691 268 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 CCDC85BQ15834 202 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 INO80DQ53TQ3 878 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 PRRT3Q5FWE3 981 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 AXDND1Q5T1B0 1012 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 FKBP1CQ5VVH2 108 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ICE2Q659A1 982 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CYP4F22Q6NT55 531 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 C16orf86Q6ZW13 317 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 GET4Q7L5D6 327 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 SAPCD2Q86UD0 394 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 FAM83AQ86UY5 434 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SKAP1Q86WV1 359 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CELF2-AS1Q8N7Q2 184 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 KBTBD3Q8NAB2 608 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ENOX1Q8TC92 643 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 PPM1EQ8WY54 764 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 EAF1Q96JC9 268 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 TMEM74Q96NL1 305 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 HHIPQ96QV1 700 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 IDI2Q9BXS1 227 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CRNKL1Q9BZJ0 848 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 ARMT1Q9H993 441 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DDX4Q9NQI0 724 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 DZANK1Q9NVP4 752 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 TMEM260Q9NX78 707 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 PALD1Q9ULE6 856 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 EFR3BQ9Y2G0 817 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SLC4A4Q9Y6R1 1079 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 GAKO14976 1311 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DICER1Q9UPY3 1922 aaKnown RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 SCN9AQ15858 1988 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 TCRBV5S4A2TA0A5A2 114 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 MINDY4BA8MYZ0 360 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 ZBTB42B2RXF5 422 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 PRKAB2O43741 272 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 ENTPD3O75355 529 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 USP2O75604 605 aaPredicted RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 MBD4O95243 580 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 HLA-DOAP06340 250 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 ZNF865P0CJ78 1059 aaPredicted RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 GARTP22102 1010 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 COPB2P35606 906 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 RAB27AP51159 221 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 FKBP1BP68106 108 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SPEM2Q0P670 501 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 UBE3CQ15386 1083 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SPRED3Q2MJR0 410 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 ERICH6BQ5W0A0 696 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 DCAF15Q66K64 600 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 FBXL19Q6PCT2 694 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 LILRA6Q6PI73 481 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 FIGNL1Q6PIW4 674 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 LCORLQ8N3X6 602 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 CRACR2BQ8N4Y2 399 aaPredicted RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 UBR7Q8N806 425 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 PHC3Q8NDX5 983 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SVIPQ8NHG7 77 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 TTC8Q8TAM2 541 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 CXorf38Q8TB03 319 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 OSBP2Q969R2 916 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SEC16BQ96JE7 1060 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 TEPSINQ96N21 525 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 OSMRQ99650 979 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 FEZ1Q99689 392 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SPON2Q9BUD6 331 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 PUS7LQ9H0K6 701 aaKnown RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.23□□□□□ -1.89
SKP1-204ENST00000517691 AS3MTQ9HBK9 375 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 DIAPH3Q9NSV4 1193 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 MCM9Q9NXL9 1143 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 MARK1Q9P0L2 795 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 TAGLN3Q9UI15 199 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 PPM1HQ9ULR3 514 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 LZTS1Q9Y250 596 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 MRPS23Q9Y3D9 190 aaKnown RBP3.23□□□□□ -1.89
SKP1-204ENST00000517691 CSADQ9Y600 493 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SALL3Q9BXA9 1300 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 CNTNAP1P78357 1384 aa3.23□□□□□ -1.89
SKP1-204ENST00000517691 SCN4AP35499 1836 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 DDTLA6NHG4 134 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 METTL12A8MUP2 240 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms