RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 KSR1Q8IVT5 923 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 CEP63Q96MT8 703 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 TTLL3Q9Y4R7 772 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 PDS5AQ29RF7 1337 aaKnown RBP11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRRN2O75325 713 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 BSPRYQ5W0U4 402 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 RNF169Q8NCN4 708 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 DNAJC7Q99615 494 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 PCIF1Q9H4Z3 704 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 MED1Q15648 1581 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 KRT15P19012 456 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 POLGP54098 1239 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 TRIM7Q9C029 511 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 LACRTQ9GZZ8 138 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 C1orf112Q9NSG2 853 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 NARFQ9UHQ1 456 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLIT3O75094 1523 aa11.77□□□□□ -0.52
PCDHGA1-202ENST00000517417 TCRBV5S4A2TA0A5A2 114 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 NDC80O14777 642 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PALMO75781 387 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 GAS8O95995 478 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PAPD7Q5XG87 772 aaKnown RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 DMP1Q13316 513 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 GLE1Q53GS7 698 aaKnown RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 WHAMMQ8TF30 809 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PLAAQ9Y263 795 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 RGPD5Q99666 1765 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PLEKHG2Q9H7P9 1386 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 C21orf2O43822 256 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 YARSP54577 528 aaKnown RBP11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 NAA25Q14CX7 972 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 PDXDC2PQ6P474 469 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 CASC4Q6P4E1 433 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 CAPN12Q6ZSI9 719 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 FAM133AQ8N9E0 248 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
PCDHGA1-202ENST00000517417 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 GH2P01242 217 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 ADRA2BP18089 450 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 STAT2P52630 851 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 GUCY1A3Q02108 690 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 MGARPQ8TDB4 240 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 STRCP1A6NGW2 1772 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 FANCGO15287 622 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATF7P17544 494 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 CCDC125Q86Z20 511 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 RHOBTB3O94955 611 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 SERPING1P05155 500 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 CLNS1AP54105 237 aaKnown RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 PKN1Q16512 942 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 FAM186BQ8IYM0 893 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 MS4A14Q96JA4 679 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 EHD2Q9NZN4 543 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
PCDHGA1-202ENST00000517417 MESDQ14696 234 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 GPR162Q16538 588 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 INTS8Q75QN2 995 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 ZBTB8OSQ8IWT0 167 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 PLEKP08567 350 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 CLUL1Q15846 466 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 CFAP157Q5JU67 520 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms