RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LIG3P49916 1009 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 HLCSP50747 726 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 IRF9Q00978 393 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZNF252P-AS1Q0IIN9 211 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 INPP5AQ14642 412 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZNF169Q14929 603 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZMAT1Q5H9K5 638 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 PXDC1Q5TGL8 231 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 C16orf46Q6P387 395 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 IRF2BP2Q7Z5L9 587 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 GPR135Q8IZ08 494 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 SLC44A3Q8N4M1 653 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 PGBD4Q96DM1 585 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 FAM193BQ96PV7 902 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 PYGO2Q9BRQ0 406 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 CARD11Q9BXL7 1154 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 ASPNQ9BXN1 380 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 SAP130Q9H0E3 1048 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 WFDC1Q9HC57 220 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 CACNA2D2Q9NY47 1150 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 TUBA8Q9NY65 449 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 DKK2Q9UBU2 259 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 SH3BP1Q9Y3L3 701 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 SSPOA2VEC9 5147 aa-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 SYNE2Q8WXH0 6885 aaKnown RBP-0.11□□□□□ -2.43
SNORA40.16-201ENST00000517238 APBB1O00213 710 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 SOCS2O14508 198 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZBTB39O15060 712 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 SLC28A2O43868 658 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TRIM37O94972 964 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 KRTAP1-4P0C5Y4 121 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 WT1P19544 449 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 EPHB2P29323 1055 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TNNI2P48788 182 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 RARRES1P49788 294 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 SLC10A2Q12908 348 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TCEA2Q15560 299 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 CR1LQ2VPA4 569 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 XKR6Q5GH73 641 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 WWC2Q6AWC2 1192 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TMC3Q7Z5M5 1100 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 YTHDF3Q7Z739 585 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 MRPL41Q8IXM3 137 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 FNBP4Q8N3X1 1017 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 CPT1CQ8TCG5 803 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 MYEOVQ96EZ4 313 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 PLPPR2Q96GM1 343 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TMEM87BQ96K49 555 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 KATNBL1Q9H079 304 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 EHD4Q9H223 541 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 SNRKQ9NRH2 765 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 SLC17A6Q9P2U8 582 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 CLIP2Q9UDT6 1046 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 TJP2Q9UDY2 1190 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 FOXD3Q9UJU5 478 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 AFG3L2Q9Y4W6 797 aa-0.12□□□□□ -2.43
SNORA40.16-201ENST00000517238 PRR36Q9H6K5 1346 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 SYT5O00445 386 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 TNFRSF10BO14763 440 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ARHGAP6O43182 974 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 PRAMEF1O95521 474 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 CKMP06732 381 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 NME2P22392 152 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 MPLP40238 635 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 RPL36AP83881 106 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 SMAD3P84022 425 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 EIF4EBP2Q13542 120 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZNF268Q14587 947 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 SMAD2Q15796 467 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZNF672Q499Z4 452 aaPredicted RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 KHDRBS2Q5VWX1 349 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 SLC6A19Q695T7 634 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ARHGEF19Q8IW93 802 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 FAM126BQ8IXS8 530 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 PHACTR4Q8IZ21 702 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 LZTR1Q8N653 840 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ABTB2Q8N961 1025 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 GRIN3AQ8TCU5 1115 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 CFAP44Q96MT7 982 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 ZPBPQ9BS86 351 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 CHRDL1Q9BU40 450 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 IL17RBQ9NRM6 502 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 SORCS3Q9UPU3 1222 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 MTO1Q9Y2Z2 717 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 RWDD3Q9Y3V2 267 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 NFS1Q9Y697 457 aa-0.13□□□□□ -2.43
SNORA40.16-201ENST00000517238 FBN1P35555 2871 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 KLRG2A4D1S0 409 aaPredicted RBP-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 GOLGA6L6A8MZA4 724 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 MEIS1O00470 390 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 PRB2P02812 416 aaPredicted RBP-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 SFPQP23246 707 aaKnown RBP eCLIP-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 WEE1P30291 646 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 L1CAMP32004 1257 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 BLOC1S1P78537 153 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 DNM1Q05193 864 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 PHF19Q5T6S3 580 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 PIK3R6Q5UE93 754 aa-0.14□□□□□ -2.43
SNORA40.16-201ENST00000517238 DMKNQ6E0U4 476 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms